Plasmodium knowlesi: PKNH_1139500
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Entry
PKNH_1139500 CDS
T01094
Name
(RefSeq) transcription elongation factor SPT5, putative
KO
K15172
transcription elongation factor SPT5
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PKNH_1139500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkn03021
]
PKNH_1139500
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1139500
Transcription machinery [BR:
pkn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PKNH_1139500
RNA polymerase I system
PKNH_1139500
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PKNH_1139500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOWx_SPT5
SH3_KIN17_C
KOW1_SPT5
BPL_C
Motif
Other DBs
NCBI-GeneID:
7321604
NCBI-ProteinID:
XP_002261565
UniProt:
A0A5K1TVA9
A0A384LPV4
LinkDB
All DBs
Position
11:<1823092..>1826841
Genome browser
AA seq
1249 aa
AA seq
DB search
MSESSVEGNELFDGDDEEVKEGESSPEEGEKTAAGADNATDDEVNDPDKGEVRRKRKKDD
KHTSPYVDNEAEDDDDEDEDGYDDDDDDDAKYRERKASSTTKGGSSGLKKRKLSKKRYLS
TFLDTEAQVGDDEEEEYASSYVDEFEEAKKLEKKKMYEMKLKSGTNHLAQTINKLSQRYE
NEKDIKDTLTDGETLTDEDMSGDEDEYFDEGECLTTFDSPKMWLIKLFKNGVERNIAMGI
YYKYMKLKDNDFNIKGVYVSDNLKGYIYVEADSLYMLKRFLLGFKFINLNEMTIVPVQEL
TSIFSMCHSKVIIPKVNEYVRIKRGVYMNDIGQIFEVHEKGIYAIVRLIPRIEYDKYNHS
KKGNNTHLSLTNPSMSKGASSMFDGQSGKNESYYQGDNKLELNNHGSRAIIPAGGMVGGD
TRNAGMINGQLEMLDEALQIKRKKKKERPLKKLFDREEIEQIGGVIEHGPYPRTIKYQNN
IFEENGYLLKKMNIKYLISENANITLTEIRDFNKNNSNEEDINLHVSKSFINKNSLHLFK
KGERVKIMKGELYNLIGTITNVSDNVLTINPDNLAKNFKFLPSDVTKYFLEGDNVTVING
IHKGKSGLISLLDYKENVALIFSPSLNTEFRSSIQDLSACEHSSSEGLGGINSLNGFSIG
DLIELSDRQIGILTYIDKNKHIRVLTSHNTTLHTTIGTITSKRSAIGQVCKDENGNIIQA
KDIIQVVRGIHKNKVAVVNYIWKNKVFAKINKKIEDNGFVVMDSHNCILTGNPNEKKRIV
THNNLFRANTSIIPRRNNTYQSFIGKTVKILSGVYKGLLGDVIDAERDEFTLLLKIKPKT
IRQKKNECAIADSFKDHYTITDDRYYKGSGGASGGEVLDNSSRWRNISDRSPRYDRVGYD
RIGYESSLYGESARKSADWHRGSHSGNYDEERWRGSHRPPEGHTPDHNPDRSAAKGANGS
NDINASSHAAPWNQSNGWKGTNSSHQHPPPPISYDQKNFNGNWSKTSHENHSNSNNTSYN
YHHDGRASHPTHFNEPHSRGEGMNEGSIKNATRKNNMAEEFMNGQYETGPGSHNLNTDQR
YNDSLRRGGKNNTSSKGLGKWDDVQSTGGINGGVSNTGFTSASNFLEMHRDKNNEDKASP
LWLVEGIMIKVITPGPFYNEIGRVTEVMKKSLYTILKIATEKTSFSIVSDAVIPLNPNKI
NEEVLVVDEGKVVEGIVVDIQNDDIQVNTAQGIFTYNVKNIFLFKKQFP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcaagtgtggagggaaacgaactgttcgacggtgacgatgaggaggtgaag
gaaggagaaagctcccccgaggaaggggagaaaactgcagcgggtgctgataatgctact
gatgatgaggttaacgaccccgacaaaggagaagtacgcagaaagaggaagaaggatgat
aaacacacatctccatacgtggataacgaagcggaggatgacgatgacgaagacgaagac
gggtatgatgatgatgatgatgacgacgcgaagtacagagaaagaaaggctagtagcacc
accaagggggggagtagtgggctcaaaaaaaggaagctctcgaagaagaggtacctgtcg
accttcctggacacagaggcgcaagtgggagacgatgaggaggaggagtacgccagttcc
tacgtagatgaattcgaagaagcaaaaaaattggaaaagaaaaaaatgtatgaaatgaag
ttgaaaagtggaacgaaccatttagcgcaaaccatcaacaagttatcgcaacggtacgaa
aatgaaaaggatataaaagatacccttacggatggggaaacactaacagatgaggatatg
tcaggagatgaggacgagtacttcgatgaaggagaatgcttgacaacgtttgatagcccc
aaaatgtggctaatcaaattgttcaagaatggagtggagagaaatatagctatgggaatt
tattacaagtacatgaagttaaaagacaatgacttcaacattaagggagtctacgtttca
gacaatctgaaaggatatatatatgtcgaggcggatagtttgtacatgttaaaaaggttt
cttttggggttcaagtttattaacctaaatgagatgaccattgtaccagtgcaagaatta
acttccattttttctatgtgccactccaaagttattataccaaaggtgaatgaatacgtt
cgtattaagaggggagtttatatgaatgatatagggcaaatatttgaggtacacgaaaag
ggtatttatgccattgttaggctaatcccaagaatcgaatatgataaatacaaccattct
aaaaagggtaataacacccacctaagtttgactaatccgagcatgagtaaaggagcctca
tccatgttcgatggacagagcgggaagaatgaatcctactaccaaggggataataagcta
gagttgaataatcatggtagcagggctatcatccccgcgggggggatggtgggaggggat
acgagaaacgctggaatgataaatggacagttggaaatgttagacgaagcgctacaaatt
aagaggaagaaaaaaaaagaaagaccattaaaaaaattattcgatcgagaagaaatagaa
caaataggaggagtcattgaacatggaccttacccaagaacgataaaatatcaaaataat
atttttgaagaaaatggctacctactaaaaaaaatgaacataaaatatcttatatccgaa
aatgcaaatattaccttaacggaaatacgagacttcaataaaaataacagcaatgaggag
gatatcaatctccatgttagcaaatcctttattaataagaattctctacacctgtttaag
aagggagagagagtgaaaattatgaagggagaattgtataaccttatagggaccataaca
aatgtgagtgataatgtgttaaccatcaatccagacaatttagcgaagaactttaaattc
cttccaagtgatgtaaccaaatatttccttgagggagataacgtaacagttatcaatgga
attcataagggtaagagtggactgatttcattgctcgattataaagaaaatgttgctctt
attttttctccttctttgaataccgaatttcgttcttccattcaagatctctctgcctgt
gagcatagcagcagtgaagggctcggtggaattaattcccttaacgggttctccatcggt
gatctcatagaattgagtgacagacaaattggtatattaacatacatcgataagaacaaa
catattcgggtgctaacaagccataatacaactttgcacaccacaattggaaccatcacg
tctaaacgatctgccattggccaagtgtgcaaagacgaaaatggaaatatcatccaggct
aaagatatcatacaagtcgtgcgagggattcacaagaataaagttgccgtggtgaattat
atctggaagaataaagtgttcgccaagattaacaagaagattgaggataacggctttgtc
gtcatggacagccataactgcatactcactggaaacccgaatgaaaagaaaagaattgtt
acacataataatctgttcagagcaaacaccagtataattcccagaaggaataatacctac
caatccttcattggaaaaaccgtgaaaattttaagtggggtttataagggcctccttggg
gatgtaatagatgccgaacgggacgagtttacactcctcttgaagatcaagcctaagacc
ataaggcagaaaaaaaacgaatgcgccattgccgactcgttcaaggatcattacaccatc
acggatgatagatattacaagggatcaggaggggcatcagggggagaggtcctggacaac
tcctcgaggtggagaaacattagtgacagaagccccaggtacgatcgggtcgggtacgac
agaatcggatacgagtcctcgctctacggtgaaagcgcaaggaagagtgctgactggcac
aggggttctcacagtggaaactacgatgaggagcgatggaggggaagtcaccgcccacct
gagggacacacccccgatcacaacccagacaggagtgccgcaaaaggtgcaaatggttca
aatgacataaacgcttcttcccatgctgcaccgtggaaccaatcgaacgggtggaaagga
acgaatagcagccatcagcacccgccccctccaatatcgtatgaccagaaaaacttcaac
ggaaactggtccaagacttcacacgaaaatcattcaaacagtaacaacaccagttataac
taccatcacgatggcagagcaagtcatccgactcattttaacgaaccacatagcagggga
gaaggaatgaatgaaggtagcataaaaaatgccaccagaaagaacaacatggcagaagaa
tttatgaatgggcagtacgaaacaggacccggctcccacaatttgaataccgaccaaaga
tataacgatagtctgagaagaggcggtaaaaacaacacctcctccaaggggctaggaaaa
tgggatgatgtccaaagcactggtggcataaatggaggggtgagcaatactggcttcacc
agtgcatctaatttcttggagatgcaccgagacaagaacaatgaagacaaggcgtctcca
ctttggctagtcgaaggaattatgataaaggtgataacaccgggacccttttacaacgaa
attgggagagtcacagaggtgatgaagaagagcttgtacaccatactaaaaatagcaacc
gaaaaaacgtcctttagcatcgtatccgacgctgtgattcctttgaatccaaacaaaata
aatgaagaagttcttgtcgtggatgagggaaaggtcgtcgagggtattgttgtagacata
cagaatgatgatatccaggtgaataccgcgcagggcatatttacttacaatgtgaaaaat
atttttttgtttaagaagcagtttccatga
DBGET
integrated database retrieval system
