Plasmodium knowlesi: PKNH_1207100
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Entry
PKNH_1207100 CDS
T01094
Name
(RefSeq) splicing factor 1, putative
KO
K13091
RNA-binding protein 23/39
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1207100
Spliceosome [BR:
pkn03041
]
Common components
Common spliceosomal components
General mRNP proteins
PKNH_1207100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
7322122
NCBI-ProteinID:
XP_002260124
UniProt:
A0A5K1V9X8
A0A384KZX7
LinkDB
All DBs
Position
12:complement(334909..338004)
Genome browser
AA seq
970 aa
AA seq
DB search
MEDNSYFDEVEKLLENKSKNSEEENGVVQNKSRKKKELNKRRANGKSDKCSDNEMVRKDQ
KEKYASGDGNEEDENNDQHSTGNDELALKKKFHKELNGGKRSGRGRKSEERGGKHKSREK
ISEGNSGSSGEDMTDRSHATSEDGSDDRRNKGKAKRTGLREREHDNRKDRKKKDRVRDGG
SDNSVEKRKTYSSDESSSEQKERRKRYKGRDRMVKSRREVSQSKSGESGEEDELEEKERI
KKKNGVERERRRKGHAKKDQKRRGDRQSDSENEAETEGEETNGEGKSDGTDSNDEGESAS
DGDRRKPKGKVKNAVKRSENRGRKRRAKSESEEESNLSTDSDGGERGRRGRGGGSAGGVV
KSDEEEDGNSETSENRKNREKKRRRHRRGSPGSERASRSKRKGSYGNDSNDEVEDGANDG
GDTDDGDDKSDGDRSGGEDAKKKKRKNRNDKESERKRAERDASSSESSSSGEEDHRSKRK
RRKASPSISESDSSDAVESDRRSRSAKRRKRERYELERRERHRDRERERDRERERDRERE
RARERMWKERERERERERERLRKEIEEARIRREKRREEKRLQKEQEEAKRDDLTVLVLNL
DLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVKALSANGYMLK
NRPIKIQSSQAEKNRAAKAAKHQPIDPNDIPIKLYIGGLVGPLGNISEQELKQLFNPFGE
ILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKVSFAQDSKYILAS
EKEAKEKVLAKLMAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAGSKIALMQKLQRDTI
LDSGISSQFTTGANAIMQTTSLGAAQSNTLNNITPNLVLCNMFSPNDENIGSDPDFFSDI
IEDVKEECSKYGSITKIWMDTKNIDGKIYIKYTKQDEAFKAFQFLNGRYFGGSLINAYFV
TEEMWNSICV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaagataactcctactttgatgaggtagagaagctcctggaaaataaaagtaagaac
tctgaggaggaaaatggagttgtacaaaataagagcagaaaaaaaaaagaattaaataaa
agaagagctaatggaaagtcggacaaatgcagtgacaacgaaatggtgaggaaggatcaa
aaggaaaaatatgccagtggtgatggaaatgaagaggacgaaaataatgaccaacacagc
acgggaaatgacgaattggctttgaagaaaaaattccataaagagttaaatgggggaaag
aggagcggaagaggaaggaaaagtgaagagcggggtggtaaacataaatctagagaaaag
ataagtgagggcaatagtggaagtagtggtgaagacatgacagatcggagccatgctaca
agtgaagatggcagtgatgacaggcgcaacaagggtaaggcgaaaaggactggcttgagg
gaaagagagcatgacaatcgtaaggatagaaagaaaaaagacagagtaagagacggaggg
agtgataacagtgtggaaaaaaggaaaacatattcatctgatgagtcgagtagtgagcag
aaagaaagaaggaagagatataaaggtagggataggatggtcaagtcgcgcagggaagtg
tcgcagtctaagtctggcgaaagtggtgaggaggatgagttggaagaaaaggagagaatt
aaaaaaaagaatggcgtggagagagaaagaaggagaaaaggtcacgcgaaaaaggaccag
aaaagaaggggtgataggcaaagtgactcagagaacgaagcagaaactgagggagaggag
acgaatggcgaaggcaagagtgatggtacagacagcaacgatgagggtgagagtgcaagt
gatggcgacaggaggaagccgaagggcaaagtgaaaaatgctgtgaagcgaagtgaaaac
aggggacgcaaaagaagggcgaaatcagagtccgaggaggagtctaatttgtccacggat
tccgatggtggcgaaagaggaagaagaggaagaggtggaggaagtgcaggaggagtggta
aagtcggacgaggaggaagacgggaacagcgaaactagcgaaaatcggaaaaaccgagaa
aagaaaaggaggaggcacagaagggggagccccggtagtgaacgcgcttctcgtagtaaa
aggaaaggttcatatggaaatgacagcaatgatgaggtggaggatggcgctaacgatggt
ggcgacactgatgacggtgatgacaaatccgatggggaccgttccggaggtgaggacgca
aaaaaaaagaagagaaaaaacaggaacgacaaagaaagtgagagaaaaagagcggaacga
gatgcctcgtccagtgaaagctcctctagtggggaagaggaccataggtcgaaacgaaaa
aggagaaaagccagtcctagcataagcgagtcggattcgagtgatgcggttgagagtgac
cggaggtcgaggagcgcgaaaaggaggaaacgagagaggtacgaattagagagaagggaa
agacatcgagatagagagagagagcgcgatagggagagggagcgcgatagggagagggag
cgcgcgcgggaacgaatgtggaaggagcgcgaacgggagagagaacgagaaagagaaaga
ctgagaaaggaaatagaagaagcaagaattagaagagaaaaaagaagagaagagaaaaga
ctacagaaagaacaggaggaagcaaagagggacgacttaacagtactggtactgaactta
gacctaaaggcagatgaaagggacatatatgaatttttttcagaagttgcaggaaaggta
agagatattcagtgtataaaagatcagaggtcgggaaagtctaaaggagtagcttatgta
gaattctatactcaagaagcagtggtaaaagctttatcggctaatggatatatgttaaaa
aatagacctataaaaatacaatcttcccaagcggaaaaaaatagagccgcaaaagccgcc
aaacatcaacccattgacccaaatgatattcctataaaattatacattggtggattggta
ggtccgttagggaacatctcggagcaagaattaaaacagctgtttaatccttttggagaa
attcttgaagtagaaattcatcgagatccttacacagggaaatgtaaagggtttgggttc
attcaattctttagagcatcggaggccattgaagctatgggagttttaaatggaatggaa
atagcaggtcgagaattaaaagttagcttcgctcaggattctaaatatatcctagcatct
gaaaaggaggcaaaggaaaaagtgctcgcgaagctcatggcgaagaaggccaaagctgaa
gaaaaagtggaagagcccgacaatgagaaaattgacaacgatgatgatgatggaggtggg
ctcattgccggggcaggaagtaaaattgccctcatgcagaagttgcagcgagacactatc
cttgattctgggatatcgagtcagttcaccacgggcgccaatgcaatcatgcagacgaca
tcgctcggagccgctcagtccaacaccctcaacaacatcacgcccaacctggttctctgc
aatatgttttcgcccaatgatgaaaacatcggttcggatccagactttttcagcgacata
attgaagatgttaaggaggagtgtagcaagtacggaagtattaccaagatttggatggat
acaaaaaatatcgacgggaaaatttatatcaagtatacaaagcaggatgaagccttcaag
gcatttcagtttctgaatggaagatactttggagggtccctgataaatgcttattttgtg
acggaggaaatgtggaattcgatatgtgtgtag
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