Plasmodium knowlesi: PKNH_1208300
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Entry
PKNH_1208300 CDS
T01094
Name
(RefSeq) DNA-directed RNA polymerase, alpha subunit, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PKNH_1208300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkn03021
]
PKNH_1208300
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_1208300
Enzymes [BR:
pkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PKNH_1208300
Transcription machinery [BR:
pkn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PKNH_1208300
DNA repair and recombination proteins [BR:
pkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PKNH_1208300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
UCH_C
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
7322134
NCBI-ProteinID:
XP_002260136
UniProt:
B3L930
A0A5K1UVJ4
LinkDB
All DBs
Position
12:complement(373705..376122)
Genome browser
AA seq
805 aa
AA seq
DB search
MMWLIGLPTWVHLLIITCNALQIRKSCFIPSYQNVWPIESNCEGKVHTQNCSSSRRCSRR
KGGEQNKWIAFSKDDEIEEIRIPEQPTDDYKMGRRKQFIKKYQVKREEVEEYIEQMKRNS
SSGYEPQFPKDAFRTPDGLTNVILDYKYKNDNLKIHNYYSFFVYFLKKLAEQSEKKKKKK
KKEINEPNDEEDQMDREPLISIQDFLFLKKKGFFEGELYTWKNWIILNRGEWEDYIGYGE
VDKEKEYQIETLRKMVEPKMKRMPIEYWGSFRAIDFNVNHYPIYKKLYDFFDKISVSGNE
PNEKFYPFLFYPRFSVRRDRSGLGYGDAQFFGNYGDIYKKREERLRRLRADGNVGEGVVD
TAGIDTHTSGESESVVHSSLHRESFIDKYDFGPNDIKVEEATDIIKYPQNGRLYQKFYIG
PLNITDGHTFGTLLKYVCQTQVYGYAIVAIKVHNMNEDTRIDNVQEDLLEIALNLSDVCI
YSKEINIETNVRLIFKGPLMVVAGMIPLPSHLQVVNKEQYICTLKEDGYLDISIKIEYGK
GHWLTYEKGLYKREVGSDNECMKKRQVKEVVEKNYMPISASFGSCRMVRMAVHKIATKYW
CEDRCEFTDPKQMLVMEIWSDCRMLPKNVLLYGIKNIKKILRKFREMIISDTDFPSDVED
EEIKKLWPAIDRYKFLQTKQKMEGGPPIYDVDTQSDSGGNKGAGDGNGERDAHSQLGSQN
LLDSFSQKLVDPDNFPKHSNILLPLEDTPPPFLDTLEWLKMEVKKDKIRKKRKSSEKKTS
KAANKRTFDYDDYLDDSLGDILDEG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggctgataggtcttcctacatgggtccacctcctgattataacctgcaatgct
ctacaaattcggaaaagttgcttcatacctagttaccaaaatgtgtggcccatcgaaagc
aactgcgagggaaaagtgcacacacaaaactgcagtagcagtcgccgctgtagcaggagg
aaaggaggggaacagaacaaatggatcgcatttagcaaagatgacgagatagaggaaatc
aggataccagaacaaccgactgatgattataaaatgggaagaaggaaacaattcataaaa
aagtatcaagtgaaaagggaagaagtagaggaatacatagaacaaatgaaaagaaattca
agtagtggatatgaacctcaatttccaaaggatgcttttaggaccccagatggattaaca
aatgtcattttggattataaatacaaaaatgataatttaaagattcataattattactct
ttttttgtgtatttcttaaaaaagctagctgagcaatcggaaaaaaaaaagaaaaaaaaa
aaaaaagaaataaatgagccaaatgacgaagaagatcaaatggatagagaaccactaatt
agcatacaagattttctcttcctaaaaaagaagggattctttgaaggagaattgtacaca
tggaaaaattggattattcttaatcgtggagagtgggaagattacatcggctacggagaa
gtagacaaagaaaaagaataccaaattgagacgctacgaaaaatggtagagcccaagatg
aaaagaatgcctatagaatactggggtagctttagggcaatcgacttcaatgtgaatcat
tatcccatttacaaaaagttgtatgatttttttgacaagatcagtgtgagtggcaacgag
ccgaacgagaagttttaccccttcctcttctatccccggtttagtgtgcgcagggataga
tcggggctgggctatggggacgcgcagtttttcggtaattacggagacatctacaagaag
cgcgaagaacgcctgcgcaggttgcgtgctgatggtaatgttggcgaaggggttgtggac
actgcaggaatcgatacgcacacatcgggcgagagtgaaagcgtagtgcattccagcctg
cacagggagagcttcatagacaaatacgatttcgggccaaatgacatcaaagtagaggaa
gcgacagacataataaagtatccacagaacgggaggctctaccagaagttttacattggg
cccctaaacataaccgatgggcatacctttggcactctcttgaaatacgtatgtcagact
caggtgtatgggtatgccatagtcgccattaaagtccataacatgaatgaagatactcga
atagacaatgtacaggaggatctcctagaaattgcacttaatttatctgatgtatgtata
tacagcaaagaaataaatatagagacaaacgtacgactcatttttaaaggacctttgatg
gtagtagcagggatgatacccctaccatctcacctacaagtagttaataaggagcagtac
atctgtacactgaaagaagatggttatctagacatttcgataaaaatcgaatatggaaaa
ggtcactggctaacatacgaaaagggattatataaaagagaagtgggttccgataacgaa
tgtatgaaaaaaagacaagtgaaggaagttgttgaaaagaattatatgcctataagtgct
agctttggtagctgtcgtatggtacgtatggctgtacataaaatagccactaagtattgg
tgtgaagataggtgtgaatttaccgaccccaaacaaatgcttgtaatggaaatatggagc
gactgtaggatgcttcccaagaatgtcctgctgtatggaattaaaaatataaaaaaaatt
ttgagaaaattcagagagatgataatttccgacacagatttcccatccgatgtggaagac
gaggagataaagaagctgtggcctgccattgatcggtacaaatttttacagaccaagcag
aagatggagggaggcccaccaatctatgacgtggacacgcagagtgatagcggaggaaat
aagggcgcaggtgacgggaatggtgagcgagatgcacacagtcaattgggtagccagaac
ttgttagactcattttcgcaaaagcttgtggacccggacaactttcccaagcactcaaat
atcctcctgccgctggaggatacaccaccccccttcctggataccctggagtggctaaaa
atggaggtaaagaaagacaaaattcgaaagaagaggaaaagttcagagaaaaaaacttcc
aaagcggctaacaagcgcaccttcgattatgacgactacctggacgacagtttgggcgat
atactggatgagggctga
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integrated database retrieval system
