Plasmodium knowlesi: PKNH_1216200
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Entry
PKNH_1216200 CDS
T01094
Name
(RefSeq) ribonuclease Z, putative
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkn03016
]
PKNH_1216200
Enzymes [BR:
pkn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PKNH_1216200
Transfer RNA biogenesis [BR:
pkn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PKNH_1216200
Prokaryotic type
PKNH_1216200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B_6
Lactamase_B
Dapper
DUF445
Motif
Other DBs
NCBI-GeneID:
7322266
NCBI-ProteinID:
XP_002260213
UniProt:
B3L9A7
LinkDB
All DBs
Position
12:complement(725002..729422)
Genome browser
AA seq
950 aa
AA seq
DB search
MEVYIQMVGCHKLAVPPTLRLFVNGEFTLFNCGENVQRFLNEHKLHVVKTRNIFFTKINP
ETIGGLVGLLLTIDNIANSDISIYGPKPIEQIVNNFKSSFAKLKNIKLQVHEFCESLPIV
LKGNVVITPIVLQEKGENDMPNQCIKEVHNIEGNIAPESNDSHREGMNPSREGGTVKHGS
SGESRLDNFKRRRMEGGCIPNGDNHQSGHKNGEADKENTPSGEYPLKDTPNGEYPPRILP
DEGIPKGNHLDEELVHQERCLITTQDERYDKGTKAEKAQIKKKFSTICYAIECPQTIGKF
HVEKAKRLNIPPGKYYGILKSGRSITLNDKVIKPEDVCDKNIDGRKALVIDVEDAVDVKY
LLEEFASEGNSYLKNLQYIFHLSGEEITNMDNYKNFFLSLKNVKNIKCNQSNTSLKVCPF
VSTASLNNFLSKLLPTIFLKYKADTPLYELWHASADDADEDGRERGKLASPAKEDGPTCQ
IGNSSQKASASYGPTAGDPKEVKEEVNGRVTEEVNGRVTEEVNGRMTEEVNDEVNNEVNA
EVNDEVNNEVNAEVNDEVNNEVNAEVNDEVNDEVNDAKDQVEKDAAKQTECEQGDSYLVY
NPLCKFILHPFHKVSISTDEMLRELYPTIFNSAKISNVLRNNEELLNRFEHFNNKATQSY
LKYPSFYFLGTGCSMPSTFRNVSGIILNVEENFRIVLDFGEGSLYQLYWMSQSWLHFSNT
IKSIKVVFISHAHADHHMGLYYLLHMRRLLFPHLDDPLILIPSTLKSWMNLFNELFFDKP
VNVLYNEENLEVKEKVGDDDSFVFLRPFKVKHVKESYGIKIEGKNIGSVVYSADTRPCDN
VKTFSKNCDILIHEATFDDELLDEAIYKNHSTTHEAMQISLEVECKTLILTHFSQRYPKA
PKLNKSSSSEINEIMNKTIYSFDYMCIPLNLINELPHYFSILLNLLEKIF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtacatacaaatggtagggtgtcacaagttggcagtaccgccaaccctgagg
ctatttgtgaacggggaattcacactgtttaactgtggagaaaacgtacaaagatttttg
aacgagcataagttacatgtcgttaaaactaggaatatattttttacgaaaataaatcca
gaaacgattggggggttagtcggtctcctcctaaccatagacaacatagcaaatagtgac
atatccatttatggacccaagccgatagaacagatagttaacaatttcaaatcctccttt
gcgaaactgaaaaatataaaattgcaagtacacgaattttgtgaaagtcttcctatagtt
ttaaagggaaacgttgttataaccccaatagtactacaagaaaaaggagaaaatgacatg
cccaatcagtgcataaaggaggtacataatattgaaggtaacatagctcccgaatcgaat
gactcgcatcgtgagggaatgaacccctcacgtgaagggggcacagtaaagcatggctcg
tctggtgaaagtcgtttggataattttaagaggaggaggatggaaggagggtgcatcccg
aatggagacaatcaccagagtggccacaaaaatggcgaagcagacaaggaaaatacccca
agtggagaatatcccctaaaggacactccaaatggagaatatccccctagaatcctcccc
gatgaaggaatccctaagggaaatcacctagatgaggagcttgttcaccaagaaagatgc
ctcatcactacacaagacgaacggtatgacaaaggtaccaaagcagagaaggcacaaatt
aagaaaaagttcagcaccatttgctatgcaattgagtgtcctcaaacaattggaaaattc
cacgtcgagaaggcaaagagattaaatattccaccaggaaaatactatggaatactaaaa
tctggaagatccattacgttaaatgataaagtaataaagcctgaagacgtgtgcgataaa
aacatagacggaaggaaggcactagtcattgatgtagaggatgctgttgatgtaaaatat
ttgttggaggaatttgctagtgagggaaattcttatttaaaaaatttgcagtacattttt
catttatctggagaagaaattacgaatatggacaattataaaaatttttttttaagtttg
aaaaatgtgaaaaatattaagtgtaatcaatcaaatacttctttgaaagtatgtccattt
gtatccacagcatcattgaacaacttcctttctaaattattgcctaccatttttttgaag
tacaaagcggacacccccctgtacgaactttggcacgcatcagcggatgatgctgatgag
gatgggagggaaaggggaaaattggcttcacctgcaaaggaggatggacccacatgtcaa
atagggaattcttcccaaaaggcgagtgcttcatatggtcctaccgcgggagatccaaaa
gaggtaaaggaggaagtgaatgggcgggtgacggaagaagtgaatgggcgggtgacggaa
gaagtgaatgggcggatgacggaagaagtgaatgatgaggtaaataacgaggtaaatgcc
gaggtgaatgatgaggtaaataacgaggtaaatgccgaggtgaatgatgaggtaaataac
gaggtaaatgccgaggtgaatgacgaggtaaatgacgaggtgaatgacgcaaaagaccaa
gtggagaaagacgcagcgaaacaaacagaatgcgaacaaggcgattcctatcttgtgtac
aacccgctgtgcaaatttattctgcacccgtttcacaaagttagcataagcacggacgaa
atgctgcgcgaattatatccaactatttttaattctgcaaaaatatccaacgtattaagg
aataatgaagaattactaaatcgatttgaacattttaataataaagcaacgcagagttac
ttaaaatatccttccttttattttctcggtaccggttgttcaatgccctcaacatttcga
aacgtttctggtattattttaaacgttgaagaaaatttcagaattgttttagactttgga
gagggctctctctaccagttgtactggatgagccagtcgtggcttcacttttccaacacc
attaagtcgattaaagtagtattcatttcgcacgcacacgcagatcaccacatgggactt
tactacctacttcatatgcgcagactcctctttccacacctcgatgaccccctcatattg
atcccgtcaacactaaaaagttggatgaatttatttaatgaacttttttttgacaaacca
gtgaacgtgttgtacaatgaagaaaatttggaagtaaaggaaaaagtgggagatgacgac
agctttgtatttctccgcccttttaaggttaagcatgttaaagaatcctatggcataaaa
attgaaggtaaaaatatcggttccgtggtttattcagcggacacaagaccatgcgataat
gttaaaactttctccaaaaattgtgacattttgatacacgaagccacctttgatgacgaa
ttgctggacgaggccatttataaaaaccactctacaacacatgaggctatgcaaataagt
ctagaggtcgagtgtaaaacgctaatactaactcatttcagccaaaggtatccaaaggca
ccgaaattaaacaagtcctcttcctccgaaattaacgaaattatgaataaaacaatttac
agcttcgactacatgtgcattcctttaaatttaataaacgaattacctcattatttcagc
attctattaaatttattggaaaaaatattctaa
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