Plasmodium knowlesi: PKNH_1218300
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Entry
PKNH_1218300 CDS
T01094
Name
(RefSeq) replication factor C subunit 3, putative
KO
K10756
replication factor C subunit 3/5
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03030
DNA replication
pkn03410
Base excision repair
pkn03420
Nucleotide excision repair
pkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKNH_1218300
03410 Base excision repair
PKNH_1218300
03420 Nucleotide excision repair
PKNH_1218300
03430 Mismatch repair
PKNH_1218300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkn03032
]
PKNH_1218300
03036 Chromosome and associated proteins [BR:
pkn03036
]
PKNH_1218300
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_1218300
DNA replication proteins [BR:
pkn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PKNH_1218300
DNA Replication Termination Factors
ELG1-RFC complex
PKNH_1218300
Chromosome and associated proteins [BR:
pkn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PKNH_1218300
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PKNH_1218300
Check point factors
HRAD17(Rad24)-RFC complex
PKNH_1218300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
ResIII
AAA_11
AAA_16
AAA_14
AAA_assoc_2
RuvB_N
AAA_30
DUF815
AAA_19
AAA_24
DEAD
bpMoxR
AAA_7
AAA_3
ATPase_2
NPHP3_N
RCF1-5-like_lid
AAA_5
TIP49
Viral_helicase1
SLFN-g3_helicase
nSTAND3
Mg_chelatase
ABC_tran
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
7322003
NCBI-ProteinID:
XP_002260234
UniProt:
A0A5K1VDT1
A0A384KAG3
LinkDB
All DBs
Position
12:complement(802958..804458)
Genome browser
AA seq
344 aa
AA seq
DB search
MAEVQIQKIEELTPWVEKYRPNVLNDIISHEQVISTIQKFVQKGELPHLLLHGPPGTGKT
STILAVCKELYGESRSSFVLELNASDDRGISVVRDQIKTFAESKNHYNTCEKTALKLIIL
DEADHMTYPAQNAMRRIMENYAKNVRFCLLCNYVNKITPAIQSRCTSFRFSPLKKEYMVN
KALDIAKSENVELTKDGLDSLIHVGRGDMRRILNCLQVVSLSHKNMTIDQNVILSTLDIP
LPGEVKEILNHFTKSTMKESYEFVTKLQSTKGYSIKDIMVNLYESILTYDFPDSAMCLLL
KNFGEIEERCSSGANEQITLSALISAFIEFRTELFKMKYDMNNI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttcaaatacagaagatagaagaactcacaccatgggtggaaaagtacagg
ccaaacgtgctgaacgacataatttcgcacgaacaagtcatatctacaatccaaaagttc
gtgcaaaagggagaattgccccacttgttgttgcatgggcccccagggacaggaaagaca
tccaccattttagctgtgtgcaaggaattatatggtgagtcacgaagttcctttgtatta
gaattaaacgcatcagatgatagaggtataagtgtagtaagggatcaaataaaaacattt
gcagaatcaaaaaatcattacaatacatgcgaaaagactgcactaaaattaatcatctta
gatgaagcagaccatatgacttatccagcacaaaatgccatgagaaggatcatggaaaac
tatgctaaaaatgtccgattttgtttattatgtaattatgtaaataagataacaccggca
attcaatccagatgtacctcattccgattttctcccctgaagaaggaatatatggttaat
aaagctttagatattgcgaaatcagaaaatgtggagctcacgaaagatggactggacagt
ctgatacatgttgggcgaggagacatgagaagaattttaaattgtttacaagtcgtttct
ttgagtcataaaaatatgaccattgatcagaacgttattttgtcaacgttagacattcct
ttaccgggagaggttaaggaaatattaaaccatttcactaaaagtaccatgaaagaatcg
tacgaatttgttacaaaattacagagcactaagggatactccataaaggatattatggtg
aatctatatgaatccattttaacatatgattttccggactctgctatgtgtttgttgctt
aaaaactttggagaaatagaggaaaggtgttcctctggggctaacgaacaaatcacccta
tccgccctaatcagcgcattcatagaattcagaactgagctctttaaaatgaagtacgac
atgaataatatataa
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