Plasmodium knowlesi: PKNH_1222800
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Entry
PKNH_1222800 CDS
T01094
Name
(RefSeq) ATP-dependent RNA helicase DBP5, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03013
Nucleocytoplasmic transport
pkn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PKNH_1222800
03015 mRNA surveillance pathway
PKNH_1222800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1222800
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PKNH_1222800
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PKNH_1222800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
7322050
NCBI-ProteinID:
XP_002260281
UniProt:
A0A5K1VKG9
A0A384KHT8
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All DBs
Position
12:complement(<1013773..>1016298)
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AA seq
841 aa
AA seq
DB search
MSIEEETPSAEKANDEKTNNEKKNNEKTNDEKTNENSKNEELKDSPVNQEEKKDDTKVES
KDDTKEESKDDVKTDSKNDEKSNGKDEEKNEAKEDTKAEAGGDDVMNMLMSYLQKNKDDP
KIMQTMLSMMGGKGKDAATGLSEIKLPNSGAKETEGREDKNLSDKGSAMNGKKKDEEESQ
RNGDKKNKEEKETGNKMLNLFGSKSEKSIFPNFGFSSGFKNTGNETKEGSSSGAGSIFGD
GKKNFFAQFGEDKGRSGSDSMNKFGFSGFSGFSGFGNATFGNANFGNSTFGSTALGNTTL
GSGKKNEDGTTPAKEKTTQVIFSNGKSTTDASTSKEKDEGTGKSDTGMKKKFETLVEDDD
DYIIESAETKEPIEEEAISMIENMNIMNNESGKEKKLSNFDFSKALNNNTTEEVRDVKLY
RSRNTWEELNIDNELIQILTYLKFFAPSKIQGLALPYILNTNKNLIAQAQNGSGKTLTFV
ISMLSKINRNEGILQAMCICPTRELAQQNYDVVGKFTKYLTVKVFLAVPLCDKYNKNEGF
QIYVGTPGKTLDLLKRKFVDTKNVSIFVLDEADDLIDIKNNMSSQVESIKRFLPKQCQIL
LFSATYNEEVRSFADRFAPNASKISVRQEDLTLKCVKQYYLLTENEEQKYYYLSELYCSM
SISQCVIFVNSKVSAYNLYQFMTERGHNVTLICADSVISRFTKNQVQKANVLGMDPKTRD
TLMSDFKSGVSKVLICTDLLSRGIDVPTISLVINFDLPYVYHGRISENHGNHFANRKVNM
ETYIHRIGRTGRFGTKGMAINFVSKNQLVYIKQIEQFYQCVISDLEVDSEIMITSASKGG
D
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagaggaagaaacccccagtgctgaaaaggcgaacgatgaaaagacgaacaat
gaaaagaagaacaatgaaaagacgaacgatgaaaagacgaatgagaattccaaaaatgag
gagttgaaggattcccccgtaaatcaggaagagaagaaagatgacacaaaggtggaaagt
aaagatgataccaaagaggaaagtaaagatgatgtcaaaacggacagtaaaaatgatgag
aaaagcaacggaaaagatgaagaaaaaaatgaagccaaagaagacaccaaggccgaagca
ggaggagatgatgtcatgaacatgctgatgagctacctgcagaagaataaggacgatccc
aaaatcatgcaaaccatgttgagcatgatgggcgggaagggaaaagacgctgcaacaggg
ctgagtgagataaaattgccaaacagcggggccaaagaaactgaaggaagagaagacaaa
aacctctctgataaaggaagtgcaatgaatggaaagaagaaagacgaagaggaatcgcaa
agaaatggtgacaagaaaaacaaggaagagaaagagacaggaaataaaatgctaaatctg
tttggttcgaaaagtgaaaagagcatttttcctaattttggattttccagtggattcaag
aacacaggaaatgagacaaaggagggatcatcttcaggtgcaggtagcatttttggagat
ggaaaaaaaaatttctttgctcagtttggagaagataaagggcgcagtggtagtgacagt
atgaacaagttcgggtttagtggattcagcggattcagcggatttggtaacgccaccttt
ggtaatgccaactttggtaactccacctttggtagcaccgctcttggtaacaccaccttg
ggcagtgggaagaaaaacgaagatgggaccacccctgcgaaggagaaaacaacacaagta
atcttcagcaatggaaaaagtaccacagatgctagtacaagcaaggagaaggatgaaggg
accggaaaaagcgacacgggtatgaagaaaaaattcgaaaccttggttgaagatgacgat
gattacataatagaaagcgcagaaacgaaggaaccaatcgaagaagaagcaatttcaatg
atagaaaatatgaacataatgaataacgaaagtggaaaggaaaaaaaattaagtaacttt
gattttagcaaagcattaaataataataccactgaggaagtgagagatgtgaaattatat
cgttccagaaatacatgggaagaattaaacatagataatgagcttatccaaatattgacg
tatttaaaatttttcgcaccttcaaaaatacagggtctggctcttccgtacatattaaat
actaacaaaaatttaatagcgcaggctcaaaatggatcaggaaaaacacttacctttgtc
atttccatgctttccaagattaacagaaatgaaggaattctgcaagccatgtgtatctgt
ccaacgagggaattagctcaacagaattatgatgtcgtaggaaaatttacaaaatattta
accgtgaaagtttttctagctgtaccattatgcgataaatataataaaaacgaggggttc
caaatctatgttggtacaccaggaaaaacattagacttgttgaagagaaaatttgtggat
acaaagaatgtgtcaatttttgtattagatgaagctgatgatttaatcgatattaaaaat
aatatgtcttcgcaagtggaaagtatcaaaaggtttttaccaaagcaatgccaaattctt
ctcttctctgctacatataatgaagaggtaagatcctttgcagataggtttgctccaaat
gcatcgaaaattagtgtgcgtcaggaagatttaactttaaaatgtgttaagcagtattat
ctgttaacagaaaatgaagaacagaaatactactacctttctgaattgtattgctccatg
agcatttcgcaatgtgttatttttgtcaattctaaagtttcagcttacaatctctaccag
tttatgacggagagggggcacaatgttactctcatttgtgcagatagtgttattagtaga
tttacaaaaaatcaagtacaaaaggcaaatgtgttaggcatggacccgaaaactagggat
accctaatgtccgattttaagagtggagtgtccaaagttttaatctgcacagatttgctt
tccagagggattgacgtacccaccatcagcttagttattaattttgacttaccctatgtt
tatcatggaagaatttcagaaaaccatggaaaccatttcgctaacagaaaagtgaacatg
gaaacgtacattcatcgtattggacggacaggaagatttggaacgaaaggaatggctatt
aattttgtaagtaaaaatcagttggtttatattaagcaaatagaacaattttatcagtgt
gttatatcagacttggaagtcgattctgagattatgattacatccgcctcgaagggagga
gactga
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