KEGG   Plasmodium knowlesi: PKNH_1234100
Entry
PKNH_1234100      CDS       T01094                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 12, putative
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pkn  Plasmodium knowlesi
Pathway
pkn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PKNH_1234100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pkn03009]
    PKNH_1234100
Ribosome biogenesis [BR:pkn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PKNH_1234100
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR3_2nd Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C CFAP251_N WDR54 Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 PAC11 Beta-prop_EIPR1 Utp12 Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_WDR19_2nd Beta-prop_Vps41 Beta-prop_Nup120_160 PFF1_TM Beta-prop_IP5PC_F Nrf1_DNA-bind WD_LRWD1 Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 7321927
NCBI-ProteinID: XP_002260393
UniProt: A0A5K1VEE7 A0A384KYX9
LinkDB
Position
12:<1517379..>1521257
AA seq 1237 aa
MVKSYDRYEFEDCFGIVNSKTSNCVFLNSSSILSGHDECVSLWNIQEKEIKKKLTVPFTP
PYYFFSYHVTHICVNPKDKNMIAVGYVNGCIKVFDLESNKVTSTFSGHTSGINKLKFNED
GNYLCSCGKDTNIILWDVVNDQGLFKLEGHTNIVNDIEFLRRKNNYVDNFVNNNLLISAS
KDCLIKVWDLNIQLCVQTVVDCEEEITSILINETNTRLIVACNSAVKVYKVDINVGGHDK
FSSSSKVYLTFLTSIKRANNSRIQNMKMIFLVQSEDHYDSLDVQEERLLYDDDEEDEDEN
IWNHSEKKQAEDGEDASDDGTTNDGNAKGKKPNRNEDSTENLPYGKKPNSGLNQTDKHIL
SVIKKSLNKSIKLCNRSSYCADGDNNGILLCCTNSKKIELYKINSMKNQKKSEKNKKKRI
LEKLKKKKKAILKEAQRVEKFKGTQNIDFTNLMEEVKSLEEEIAVHGKYHFHTANDEVKF
LFHYNCKFRLQYLDVYRRRKRDTYIYLLAAYVTNRLSVFQVNLFDVLTKRDEFVVRGGDE
EIRNDGKGDGEEDVGEEDDKDDDNDDEKDDNEEEEDDDEDDEDDDDDDKEEEEDDGKDDD
QSDDDESKRDHAPKDEARGDLGAPAKIVEKKIYDYSKCFKETCEINKGHNSTVQFLSLSD
KNELLVSICKKYVKVWSMRTFQNTITINLEGCTNALFCEDDEYVLISDDTGYIYLYELSN
IEMRHSYKAHANGIISMCKNLKHNRFLSVGEESYLKVFQLCWREGGAESNGESSDEGEES
EDAPRGNPPNSAKKRRRISTTGEGQPAELHSEEEEKTEKTTHLTFNEVDCYNLTDKVSCA
IYSPNGKFICVGYLNNLIEVLYSDTLKLHLTLYGHSLPITCMDISKDNTVLASSSADKFL
FLWNIEYGSITKRMHTNCDVLTKVVFFNKSNNLISVSRDGLIKMWDAIKFQCICTMDGNF
GVLTSLAINIEDNYFLTSGTHRSIRCWMKKEDDMIFLEEERDKELNLQIEKEAVRNDISY
PSSVEKNALLSKATIKTIDTIKSSEKLIEYLDIIDEELTLLDIYFKNLTEYEEAKRKNEL
PDFVQPPNKVKPRPELLNKNPFEFIIEVMCHIKKNILHEVLISLPFSYAYKLLNYIKTYL
MAFYFFQRIQNDYGKFKICGDLSFHVEYSINIVLSIVNIYRNQFLFDVKFRFLLYELHQL
IIPHLRRSLDQCAFNQSTLNFMLHGMDDEEVNVDGAL
NT seq 3714 nt   +upstreamnt  +downstreamnt
atggtgaagtcatacgatagatacgagttcgaggactgcttcggcattgtcaattcgaaa
acttccaactgcgttttcctgaacagtagtagcattttgtcagggcatgatgaatgtgta
agcctatggaatatacaagagaaggaaataaagaagaaactcacagtacccttcacacct
ccgtattattttttctcctaccatgtgacgcacatatgtgtaaaccccaaggataaaaat
atgatcgccgtggggtatgttaatggatgtattaaagtatttgatttagaatcgaacaaa
gtcacttcgactttctcaggacatacatcaggtataaataaattgaaatttaatgaggat
ggtaattatctatgctcatgtgggaaggacacgaatattatactgtgggatgtggtaaac
gatcaaggattatttaaattggaggggcacaccaatatcgttaacgatatagagtttctg
agaaggaaaaataattatgtagataattttgtgaataataatttgcttatcagtgcatcg
aaggattgcctcatcaaagtttgggatttaaacattcagttatgtgtccagactgtggtc
gactgtgaagaagaaattacgtccattctgattaacgaaacaaatactaggttaatcgtc
gcttgcaattctgccgtgaaggtgtacaaagttgacatcaacgttggtgggcacgacaag
tttagtagctcctcgaaggtgtacttgaccttcctaacctccattaaacgagccaacaac
agtcgaatacaaaatatgaagatgatttttcttgttcaaagtgaggaccactacgatagc
ctcgatgtgcaggaggaacgtttgctttatgatgacgatgaggaagatgaggatgaaaat
atttggaaccattcggaaaaaaaacaagccgaagacggagaagatgcttcagatgatggc
accaccaatgatgggaatgcaaaggggaaaaaaccaaaccggaatgaagactcaacagag
aatttgccctatgggaagaaacccaattcgggcctcaatcaaaccgataaacacatttta
agtgttataaagaaatcgctgaacaaatcgataaaattgtgcaaccgaagtagttactgc
gcagatggggacaacaatggaatcctcctctgttgtacgaactctaaaaaaatcgagttg
tacaaaataaactctatgaagaaccagaaaaaatcagaaaaaaataaaaaaaaaagaatc
ttggaaaaattaaagaagaaaaaaaaagccattttgaaagaagcccaaagggtagagaag
tttaaaggaacacaaaacatagattttactaacttgatggaggaagtgaaaagtctggag
gaagaaattgctgtacatggtaagtatcacttccacacagccaatgatgaggtaaagttt
ttgtttcattacaactgcaagttcaggctacaatacctggacgtgtaccgcagaaggaag
agggacacctatatctacctactcgcagcgtacgtgacgaatcgtttgagcgtgttccaa
gtgaacctcttcgacgttttgactaaaagggatgaattcgtcgtcagggggggtgacgag
gaaatacgcaatgatggcaagggcgatggtgaggaggatgttggggaggaggatgataag
gacgacgataacgatgatgagaaagatgataacgaagaggaagaagatgatgatgaggac
gatgaagatgacgatgatgatgataaggaggaggaggaagacgatggaaaagacgatgac
caaagcgatgatgatgaatccaagagggatcacgctcccaaagatgaagcacgcggagac
ctcggcgcgcctgccaaaattgtggagaaaaaaatttatgattactccaagtgcttcaag
gagacgtgcgaaataaacaaggggcacaacagtacggtacagtttttgagcctctccgac
aagaacgagctgttggtgtccatctgcaagaagtacgtgaaggtgtggagcatgcggacc
ttccagaataccatcaccataaacttggaggggtgtacaaacgcgttgttttgcgaagac
gatgagtatgtcctcattagcgacgacactgggtacatctacctgtacgagttgagcaac
attgagatgaggcactcgtacaaggcgcacgcgaatgggatcatcagcatgtgcaagaat
ctgaaacataaccgttttctgtccgtcggggaggagagctacttgaaggtgtttcaactg
tgctggcgagaggggggcgctgaatcgaacggtgaatcgagcgacgaaggagaggagagc
gaggatgccccaaggggcaacccacccaatagcgcgaaaaaacggcggagaataagcacc
acgggggaaggccaacctgcggaattgcactcggaggaggaagagaagacggagaaaacg
acccacctgaccttcaacgaagtggactgctacaacttaaccgacaaagtgagttgcgca
atttattcacccaacgggaagttcatctgcgtgggttacctgaacaacttgatagaggtg
ctctacagtgacaccctaaagctgcacttaacattgtatggacatagccttcccatcacg
tgcatggacatatcaaaagacaacacagtgctggcgtccagttcagcagacaagtttctc
ttcctgtggaatatagaatacggaagtatcacgaagaggatgcatacaaattgtgatgta
ctgacaaaggtggttttctttaacaaaagcaataatttgataagtgtatctagagatggg
ttgataaaaatgtgggacgcaataaaattccagtgtatctgtaccatggatgggaatttt
ggagttctcacttcgctagctataaatatagaggacaattatttccttacgtcaggaacg
catcgaagtatcagatgctggatgaaaaaagaagatgacatgattttcttagaagaagaa
agagataaagaattgaatttacaaatagagaaggaggctgtcagaaatgatatatcttac
ccatcctctgtagaaaagaatgctcttctaagcaaggccactattaaaacgattgacacc
ataaaatcgtctgaaaagttaatagaatacttggatataattgacgaggaattaacctta
ctggatatttattttaaaaatttaaccgagtatgaagaagcaaaaaggaaaaatgaactt
cctgattttgttcagcctccaaataaggtgaagccaagaccagaactgctaaataaaaat
ccatttgagttcatcattgaagttatgtgtcatataaaaaaaaacattttgcatgaagtg
ctaatttctttgcccttttcttatgcatataagttactaaattatatcaagacgtatttg
atggcattctattttttccagcgcattcaaaatgattatgggaaatttaaaatttgtgga
gatctgagtttccacgtcgagtattctatcaacatcgtcctgtccattgtgaatatatat
cggaaccagtttttgtttgacgtgaaatttaggttccttctgtacgagctgcatcaactc
attattccgcacctgaggagatccctcgatcagtgtgccttcaaccaaagcaccctcaac
tttatgctccatggtatggacgacgaggaggtaaatgttgatggagcattgtag

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