Plasmodium knowlesi: PKNH_1236300
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Entry
PKNH_1236300 CDS
T01094
Name
(RefSeq) ATP-dependent RNA helicase DDX5, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1236300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1236300
03009 Ribosome biogenesis [BR:
pkn03009
]
PKNH_1236300
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PKNH_1236300
Spliceosome [BR:
pkn03041
]
Complex A
U1 snRNP components
U1 related factors
PKNH_1236300
Complex B
PKNH_1236300
Ribosome biogenesis [BR:
pkn03009
]
Eukaryotic type
Pre-60S particles
Helicases
PKNH_1236300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
7321949
NCBI-ProteinID:
XP_002260414
UniProt:
A0A5K1UDY0
A0A384LA83
LinkDB
All DBs
Position
12:complement(1597147..1600596)
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AA seq
528 aa
AA seq
DB search
MRGFNNYNRYGNFPDYSNPYANYQAAAYGQFRPNYGDYSGNTGMSGHNSNNLSTLGKNLM
QIDWSNVKLVPFEKNFYKEHHDISNLSSKEVKEIRDKHRITILEGEGVPNPVESISKIGF
PDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPS
LKYGDGPIVLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGGVPKSGQIYALKQGVHIL
IACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDRQTLMWSAT
WPKEVQSLARDLCKQQPIHVNVGSLTLTACRRIKQEIYLIEEHEKIANLKLLLQRIFRDN
DRIIVFVETKKNADFITKALRLDGVPALCIHGDKKQDERRWVLNDFKTGKSPILIATDVA
SRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLARDLVKILR
ESEQPVPPQLEKISYTSANNPRRNPYYGYGRSSHNVNNIPLKGSNRYY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttcaacaactataaccgatacggcaacttcccggattactccaacccgtat
gcgaattaccaagcggcggcctacggacaattcaggcccaattacggagactactcaggc
aacacgggtatgtctggccataatagtaacaacttaagtaccttaggaaaaaacttaatg
caaatagattggtcaaatgttaagttagttccatttgagaagaacttctacaaggagcat
catgatataagtaatttgtcatcgaaagaagtaaaggaaattcgagacaaacacagaatt
accattttggaaggagagggggttcctaatccagtagaatctattagcaaaattggcttc
ccagactatgttttaaaatcgcttaaaaataacaacattgttactccgacccctattcaa
atacaaggttggccgatagcactttcaggaaaggatatgattggaaaggctgaaacagga
agtggaaaaacattagcttttattttgcccgcatttgttcacattttagctcaaccaagt
ttaaaatatggagatggtccaatcgttttggtactggctcccacgagagaattagctgaa
cagattaggcaagaatgcgtaaaattttctgtcgaatctaaaataaggaatacatgtgct
tatggaggtgtgccaaagagtggtcaaatttatgccctcaaacaaggggttcacatttta
atagcatgtccaggtcgtttaatagatttattagaacaaaatgttaccaacctaatgaga
gttacctatttagttttggatgaagcagacaaaatgttagatatgggattcgaaatacaa
attcgaaaaattgttgaacaaattagacctgacagacaaacattaatgtggtcagctact
tggccaaaggaagtgcagtccttagcaagagatttgtgtaaacaacaacctatacatgtt
aatgttggttctctaacattaactgcgtgccgtagaattaagcaagaaatttatctgatt
gaggaacatgagaagatagcaaacctcaagttgcttcttcagagaatatttcgggacaat
gacagaatcatcgtcttcgtagaaacgaagaaaaatgcagattttatcaccaaggcactc
aggctagatggtgtgcctgctttatgtatacatggggataagaaacaggatgagagaagg
tgggtattgaatgatttcaaaacaggaaagagtcccattctgattgcaacagatgtagct
tccagaggactagatattaaggatgtaaaatatgtcgtaaattttgattttccaaatcaa
attgaagattatgtacacagaattggtagaacaggtcgagcaggagctcacggagcttcc
ttcacttttttaacgtccgataaatatagactagctagagatttagttaaaatactaaga
gagtcggaacaacctgtacctccacagctggaaaaaatatcctacacatctgctaacaac
ccaaggagaaacccctactatggttatggtcgctcatcacacaatgtaaataacattccg
ctaaagggaagcaatagatattactaa
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