Plasmodium knowlesi: PKNH_1239000
Help
Entry
PKNH_1239000 CDS
T01094
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5, putative
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03018
RNA degradation
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1239000
09123 Folding, sorting and degradation
03018 RNA degradation
PKNH_1239000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1239000
03041 Spliceosome [BR:
pkn03041
]
PKNH_1239000
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PKNH_1239000
mRNA degradation factors
5'-3' decay
Lsm complex
PKNH_1239000
Spliceosome [BR:
pkn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PKNH_1239000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
7321975
NCBI-ProteinID:
XP_002260440
UniProt:
A0A5K1V417
A0A384L0J0
LinkDB
All DBs
Position
12:complement(<1719657..>1720276)
Genome browser
AA seq
101 aa
AA seq
DB search
MATVSGSETFLPLALMDKCIGSKIWVMLKGDKEIVGKLVGFDEYVNMVLEDVTEYTYVNN
VKKVNKIKKLLLNGLNITIMVPGGVPVNYYDYEEKLEENIA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtcagtggatcagaaacgtttttgcctcttgccctgatggataagtgcata
ggcagcaaaatatgggttatgctgaagggtgacaaggaaatagttgggaagctcgtcgga
tttgatgaatacgtgaatatggtcctagaagatgttacggaatacacatacgtaaacaac
gttaagaaagtgaataaaataaaaaagttgctgctcaacggtttgaatataacaataatg
gtcccaggaggtgtccctgttaattactacgattatgaagaaaagctggaggaaaacatc
gcatga
DBGET
integrated database retrieval system
