Plasmodium knowlesi: PKNH_1260800
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Entry
PKNH_1260800 CDS
T01094
Name
(RefSeq) RNA lariat debranching enzyme, putative
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1260800
03009 Ribosome biogenesis [BR:
pkn03009
]
PKNH_1260800
Spliceosome [BR:
pkn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PKNH_1260800
Ribosome biogenesis [BR:
pkn03009
]
Eukaryotic type
90S particles
RNase
PKNH_1260800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
7322438
NCBI-ProteinID:
XP_002259946
UniProt:
A0A5K1VLR3
A0A384L9V0
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All DBs
Position
12:2739855..2741534
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AA seq
559 aa
AA seq
DB search
MIIAVVGCTHGELNFIYATIEKLEQDNNFKVDLLICCGDFECVRYGVDNDCLNVPNKYKK
EENDFRDYFTGKKKAKVLTIFIGGNHEAVNVLKQLYYGGWVAPNIYFLGYSNIHNINDFR
ICSLSGIYKKYNFYKRYNEHYPYDEISKVSSYHIRKYEIEKLKLVKDKVDIVITHDWPNN
IEKHGDMNELLRRKFHFQSDIYNNTLGNPHTEFLLNKLKPYFWFSSHLHVKYSAIFLHSD
KKNYTRFLSLDKAEPRKHFIQILNIEKRNNIPYLSFDHLPKSSANETEGKSQFFNDDYEK
LLQHVEDVQRKDAQEGGQASTGKEAPKGEDVPTEEEAPKENTPGESNAQENTAQGNTAQG
NTAQGNTEQENTAQENTTVEEDATAERKQLYICYDEEWLAILKANHHLLAEGSDKDYNLE
KLKYPSKEDFEYIQDKLKNLENISIKGKDYYLVHGYNNPSYKNLWEQRQVFLNRFDFEEL
RMYDDFERLFFAEEVRKMDTGLPLDNPKLAEDQENGQEGKPEEPGQNNQTDEHGERSPNG
DNTPHSGNESNQNKLSIDS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgattatagccgtggtggggtgtacgcacggagagttgaatttcatttacgcgactata
gaaaagttggagcaagacaataacttcaaggtggacctgctaatctgttgcggagatttc
gaatgcgtacgatacggagtggacaatgattgtttgaatgttccaaataaatacaagaag
gaggaaaatgatttcagggattatttcacagggaaaaagaaagccaaagtgttaaccata
tttataggaggaaatcatgaagcggtaaatgtattgaagcaactgtactacggaggatgg
gtagcaccaaatatatatttccttggatattcaaatatacataatataaatgattttcga
atttgcagtcttagtggtatttacaaaaaatataatttttacaaaaggtacaatgaacat
tatccatatgatgaaatcagtaaggtgagttcctatcacattagaaagtatgaaattgaa
aaattaaaactcgtaaaggacaaagtagatattgttataacacatgattggccaaacaat
attgagaagcatggagacatgaatgagctccttaggagaaaattccattttcagtcagac
atatataataatacacttggaaatccacatactgaatttttactaaataaattaaaaccc
tatttttggttttcttctcatttacacgtaaaatactctgccatttttttacatagtgat
aaaaagaactatactcgatttctttctctggacaaagcggaacccagaaagcatttcatt
cagattttaaacattgagaaaaggaacaacattccatacctgtcgtttgatcacttgcca
aagtcttctgctaacgagacagaggggaagagccagtttttcaatgacgactatgagaag
ctcctacaacatgtggaggatgtgcagcgcaaggatgcccaggagggtgggcaggcatct
acagggaaggaggcaccaaagggggaagatgtgccgacagaggaagaagcccctaaggag
aacaccccaggggaaagcaacgctcaagaaaacaccgctcagggaaacaccgctcaggga
aacaccgctcagggaaacaccgagcaggaaaacaccgcgcaggaaaatacaactgtggag
gaagacgccactgcagagcgcaagcagttatacatatgctacgacgaggagtggctagcc
attttgaaggccaaccatcacctcctcgcggagggtagcgacaaggattacaatttggag
aagcttaagtacccctcgaaggaagactttgagtatatccaggacaagctgaaaaatctg
gaaaatatatccatcaagggcaaggactattatttggtccacgggtacaataaccccagt
tataaaaacctgtgggagcagaggcaggtcttcctgaaccgctttgatttcgaggagctc
cgaatgtacgacgactttgagcgtttgtttttcgctgaagaagtgcgcaagatggacacc
gggttgccattggacaatcccaaattggcggaagatcaggagaatgggcaagagggcaaa
ccggaagaacccgggcagaataaccaaactgatgaacacggtgaacgcagccccaacggg
gacaataccccccattcggggaacgagtccaaccaaaataaacttagcattgacagctga
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