KEGG   Plasmodium knowlesi: PKNH_1271100
Entry
PKNH_1271100      CDS       T01094                                 
Name
(RefSeq) chromatin assembly factor 1 subunit B, putative
  KO
K10752  histone-binding protein RBBP4
Organism
pkn  Plasmodium knowlesi
Pathway
pkn03082  ATP-dependent chromatin remodeling
pkn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PKNH_1271100
   03083 Polycomb repressive complex
    PKNH_1271100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pkn03036]
    PKNH_1271100
Chromosome and associated proteins [BR:pkn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     PKNH_1271100
  Histone modification proteins
   HAT complexes
    HATB complex
     PKNH_1271100
   HDAC complexes
    Sin3A-HDAC complex
     PKNH_1271100
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     PKNH_1271100
    PRC2.2
     PKNH_1271100
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     PKNH_1271100
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PKNH_1271100
  Chromatin remodeling factors
   NuRD complex
    PKNH_1271100
   NuRF complex
    PKNH_1271100
   NuRF complex (fruit fly)
    PKNH_1271100
SSDB
Motif
Pfam: CAF1C_H4-bd Beta-prop_RIG_2nd WD40_CDC20-Fz WD40 Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_EIPR1 EIF3I Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 7322500
NCBI-ProteinID: XP_002260044
UniProt: A0A5K1VLU6 A0A384KP53
LinkDB
Position
12:3090040..3091677
AA seq 545 aa
MMDIVRERNGNLDLSDSYEDEERSPALMEPHSGNTVCLSNNVNSGNTANEACVDISNERY
IIWRRNTPFLYNALLRNKLEWPSLTVEFIGIDNSFKAKTNYFTNKILLGTYTSNQDSEYV
YIGEVKAPLYSTKEDVLQFENYTGFINNKKKKKGHPLPSFEVKAKLLHPGEVIRATHLPS
NSFFIVTQTYNGSILLFDYTKHPSFPSDTSTCYPQMILKGHNGEGNGLCWNINRVYDNCG
KQSTAFKEEVDLDTTETTDGTNGKESMEEEKEEESSDELIDDVNTSNLLLASCASDGSIC
LWDINKGTKSNEVPRTYGINKTGKGADYNLKIYENTPTLSPLCTWIHKNEETSLNDIFFH
PKFKNVLGVCDDNGCMSIYDIRAKTFFSKAELNFKEHNAPMNTFSFDTFSEYTFSSGYSD
GLISIWDIRHEKASLLQIDYHTQSINRIKFCLMQSGIFGSCSDDGTACIWDISRNSVNYS
QVQKLEDDIYNNPKKIPKQLLFVHGGHVGSVYDLSWANCNTFLVATVGVDNSLQVWHMNE
QFLFQ
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgatggatattgtgcgcgaaagaaacgggaacttggacctgagtgattcatatgaagat
gaagagcgaagtcctgcgttgatggagccgcacagcggcaacaccgtctgtttgagtaac
aatgtgaatagcggaaatactgctaacgaggcgtgtgtggacatcagcaacgaacgatac
atcatctggagaagaaatacaccattcctgtacaacgccctgttgaggaacaaactggag
tggccctccctgacggtcgaatttataggcatcgataactctttcaaagcgaaaacgaat
tacttcacaaataaaatactcctcggcacatatacgtcgaatcaggattcagaatatgtg
tatattggggaggtaaaggctccactgtattcaacaaaggaagatgtcttgcagtttgaa
aactacacaggatttattaacaacaaaaagaagaaaaagggccacccactcccttctttt
gaagtaaaggccaagttgcttcatccaggggaagtcataagagctactcacctaccaagc
aactccttttttattgttacgcagacgtacaatggaagcatactactgtttgactatacg
aagcatccttcattcccctcagacacatccacgtgctacccgcagatgatcctgaagggg
cacaatggtgaaggcaatggtctatgttggaacattaatagggtttacgataactgcggc
aaacagagtactgcgtttaaggaggaagttgaccttgatacgacagaaacaacggatgga
actaatgggaaggagtcaatggaggaagaaaaagaagaagagagtagcgatgaactaatt
gatgatgtaaacacgagcaacttacttctcgcctcgtgtgcatccgatggaagtatatgc
ctgtgggatataaacaaaggaacgaagagcaacgaagtgcccagaacgtatggaataaac
aaaaccggaaaaggtgccgattataatcttaagatttacgaaaatacacctaccttgagt
cctctgtgtacgtggatacataaaaatgaggagacatcactgaacgacatattttttcac
cccaagtttaagaatgttttgggggtttgtgatgacaatggttgtatgagtatatatgat
ataagggccaaaacatttttttccaaggcggagctcaattttaaagaacataatgcaccc
atgaacaccttttctttcgatactttttctgaatacactttttcctctgggtattcagac
ggattaatatccatttgggatataagacacgagaaagcttctctgctgcagatagactat
cacacacaaagtattaataggattaaattctgcctgatgcagtcaggtatttttggatca
tgctctgatgatggcacagcatgtatatgggacatttccagaaattctgtaaattattca
caagtgcaaaaactggaagacgatatttataataatccgaagaagattccaaagcagctt
ctcttcgtccatggtggccacgttggaagtgtgtatgatctttcttgggccaactgcaac
accttcttggtggctacagtaggcgtcgacaactctctccaggtgtggcacatgaacgag
cagtttttgtttcagtga

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