Plasmodium knowlesi: PKNH_1309100
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Entry
PKNH_1309100 CDS
T01094
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7, putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03018
RNA degradation
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1309100
09123 Folding, sorting and degradation
03018 RNA degradation
PKNH_1309100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1309100
03041 Spliceosome [BR:
pkn03041
]
PKNH_1309100
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PKNH_1309100
mRNA degradation factors
5'-3' decay
Lsm complex
PKNH_1309100
Spliceosome [BR:
pkn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PKNH_1309100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
7322838
NCBI-ProteinID:
XP_002260597
UniProt:
A0A5K1VSC3
A0A384L2N4
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All DBs
Position
13:427487..428254
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AA seq
107 aa
AA seq
DB search
MSVLPTTPAYNKENKFMTDIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYI
RDPNDSLVITEKTRSIGLVVARGTSIALITPVDGTQEIANPFISEEK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcttccaacgaccccagcatataacaaagagaacaagttcatgacagacatc
aagaaatttatgaaccagaagattcgcgtcaagttcgatggtggaagagaagttgttggc
aatttaattggtcacgatgccatcttcaacttagtgttggacaaaactgaggaatatata
agagacccgaatgacagcctcgtcataacggagaaaacgaggagcatcggtttggtcgtc
gccagggggacatcgatcgccctcataacgccagtagacggcacgcaagaaatcgccaat
ccattcatatcggaagaaaagtga
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