Plasmodium knowlesi: PKNH_1315300
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Entry
PKNH_1315300 CDS
T01094
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PKNH_1315300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1315300
03012 Translation factors [BR:
pkn03012
]
PKNH_1315300
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PKNH_1315300
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PKNH_1315300
Translation factors [BR:
pkn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PKNH_1315300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ResIII
nSTAND3
AAA_14
AAA_11
NPHP3_N
Flavi_DEAD
AAA_19
T2SSE
TsaE
Sigma54_activat
ABC_tran
Motif
Other DBs
NCBI-GeneID:
7319498
NCBI-ProteinID:
XP_002258110
UniProt:
A0A5K1TZ06
A0A384KWG1
LinkDB
All DBs
Position
13:complement(711209..714132)
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AA seq
816 aa
AA seq
DB search
MIDLPILKHKKEIKKCIKRNRLIIIKGETGCGKTTQVPQIINRYFFDKRRRRGSSDAGKD
GAVCKDDNQARSPKEKAPMRMLVSLPRRVATITVAERVAKEMDRGHIGTYVGYAIRFKNV
TSDDTRIKFVTDGILIREIMNDPLLKKYTFLILDEVHERSIRTDVLLGYVRTLMEKRKKL
RIILMSATLDVDTFKNFFSDPPIISIPHKLHPVSIFYPMKPVEDYLISVVCTVLQIHFGQ
GERHDGRHDVLKDDQSDDQPDDQPEERLTELTANTRTDPPPIGDVLVFLPGQEEIEAVNL
MLKEKLKIIYKGSLLRKLIENRQGEEEEGEVLERINVALHAKNPIEDGICFHLGHREVVP
DKIYAMKILQLYSSLPNRKQRIVFEPAPPNTRKVILSTNIAETSVTIPNIKYVVDSGRVK
IKFFDAKKGSSVLKVTQISKDAAIQRSGRAGREGPGQVYRVYSKEEYDSMNPFLIPEIFR
SDLTQIYLELKAMNIANPLKFNFPENPKKELLLHSAKVLFRINAIDVENNLTDLGKKMCL
LPLNPIYANMMLCSVDFHCMDEVATIVAFLNCESIFLNYNFYEDFKIMNEESAGGSLACS
AREKRDNQDKGDVLDKDDATINAKTDESFEPAVEEDPTISDRNKLINIARRKLMHPDGDH
LTLLHIFYLWQEEATPNERKDFCNIYALNNETLQQVQKIKEQILQIMTTRMGMKISPKLH
MHKWDQVLICLCKSCFFNVARSTSNTNEFINVVTKSKLYVHPSSTLFSSHIKASFIFYSD
IVQTKRLYARTVTKVDGDWLLKYAPQNFQLVQDSTG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatctgcccatattgaagcacaagaaggaaattaaaaaatgcatcaagaggaat
aggctaattattattaagggagagacggggtgcggaaagacaacccaggtaccccaaata
ataaacagatacttttttgataaaaggaggagaagaggtagtagtgacgccggtaaggat
ggagcagtctgcaaggatgataaccaagctcggtcaccgaaggagaaagctccaatgcgc
atgctggtatcgctgcccaggagagtagcaaccattactgtagctgagagagtggccaag
gaaatggatagagggcatataggaacttacgtagggtatgccatcaggtttaaaaatgta
acttccgatgacactagaattaaatttgtaacggatggaatcctgatcagggaaattatg
aatgacccattgttaaaaaaatacactttcttaatattagatgaagtgcatgaacggtcc
attaggacagatgtcctcttgggttacgttaggacattaatggagaagagaaagaagctg
aggatcatccttatgtctgcaacattagatgtggatacttttaaaaacttcttttccgac
ccacctattatttccattccgcataaactgcatcccgttagcattttctaccccatgaag
cctgtggaggattatctcatttccgttgtgtgcaccgttctgcaaatacattttggacag
ggcgagcggcacgatggcaggcatgatgtgctgaaggatgaccagtcggatgaccaaccg
gatgaccaaccggaggagcgcttgaccgagttgacagccaacacgcggaccgacccaccc
cccattggagatgtgcttgtcttcttgcccggtcaggaagaaatagaagcagtaaactta
atgctgaaagaaaagctcaaaataatttacaaaggatccctactgcgcaaactcattgag
aatcgtcagggggaggaggaagaaggggaggtgttggaaagaattaatgtcgccctccat
gcgaagaatccaatagaagatggaatttgtttccacctcggccacagggaggtggttccg
gacaagatatacgccatgaaaattctacagctctactcgtcccttccaaatagaaagcaa
cgaatagtcttcgagcccgcgccgccaaatacgagaaaggtcatcctcagcaccaatatc
gcggagacatcagttaccattccaaacataaaatacgtggtagacagcgggcgcgtcaag
ataaaattcttcgacgcgaaaaagggtagcagtgtactcaaagtcacgcaaatatcgaag
gacgccgcaatacagagaagtgggagagcagggcgagagggacccggacaagtctacagg
gtgtactccaaggaggagtacgacagcatgaacccgtttttaattcccgagatttttcgc
tctgatctgacacagatatatttggagttgaaggccatgaatattgctaacccactgaag
tttaacttccccgaaaatccaaagaaggagctactgctgcactccgccaaagtcctcttc
cgaatcaacgcaattgacgtggaaaacaacctgaccgatcttgggaaaaagatgtgcctc
cttccactgaacccaatatatgcaaacatgatgttgtgttctgtggatttccattgtatg
gatgaagtcgctaccatcgtggcgttcctaaactgcgagagcatattcttgaactataat
ttttatgaggacttcaaaattatgaatgaggaatcggcaggaggttcccttgcatgttcc
gccagagaaaaacgcgacaaccaggacaaaggcgatgtactggacaaggacgacgccacc
attaatgcaaagacggatgaatcttttgaacccgccgtcgaggaggacccaactataagc
gacagaaacaaattaattaacatcgcgcgcaggaagctcatgcacccggatggagatcac
ctaaccctcttgcacatcttctatctctggcaggaagaagccactcccaacgagcgaaag
gatttttgcaacatatatgccttgaacaacgaaaccttacaacaagtacagaaaataaag
gagcaaattctgcaaataatgactacaagaatgggcatgaaaatatcaccaaagctacat
atgcataaatgggatcaagtattaatttgtctctgcaaatcctgtttttttaatgtggct
agatctacatctaatacaaatgagtttataaatgtcgtaacaaagagcaagttgtatgtc
cacccatcgtctactcttttcagttcgcacatcaaggcatccttcattttttattcggac
attgtgcaaacaaagcgcctctacgcacgaaccgttacaaaggtagacggagattggctt
ctcaaatatgctcctcaaaacttccaactcgtgcaggactccacggggtag
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