Plasmodium knowlesi: PKNH_1443600
Help
Entry
PKNH_1443600 CDS
T01094
Name
(RefSeq) polyadenylate-binding protein 1, putative
KO
K13126
polyadenylate-binding protein
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03015
mRNA surveillance pathway
pkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PKNH_1443600
09123 Folding, sorting and degradation
03018 RNA degradation
PKNH_1443600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1443600
03041 Spliceosome [BR:
pkn03041
]
PKNH_1443600
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PKNH_1443600
mRNA cycle factors
Stress granule specific factors
PKNH_1443600
Spliceosome [BR:
pkn03041
]
Complex C
Other components
Complex C specific factors
PKNH_1443600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_3
RRM_7
RRM_8
RBD_DEAH11
BRAP2
Motif
Other DBs
NCBI-GeneID:
7323331
NCBI-ProteinID:
XP_002262313
UniProt:
A0A5K1U8S2
A0A384LEX7
LinkDB
All DBs
Position
14:<1901838..>1904462
Genome browser
AA seq
874 aa
AA seq
DB search
MLATGTNIMHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA
YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL
FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI
KRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYAD
SESAKNAMENLNGKKITDDGQIDHTYDAKKEEAENANANNGTNNGIATGADANGVEGEVG
KGTTVDGKGDNKVSTAGDTGKSGEETEGGANTTGATSESVKGNEGNKVESDDKANETSGV
TSTDGASNVKEDGASSIAANAAAQGESTNGINKKDSGSESADSPNILYVGPHQSRARRHA
ILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSK
GFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNN
ALNSPMQYPNPQSPQLQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQ
LNFNANLRGQMNQMRFYTQGGANMMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSA
PGQHNNNQAMQQQPANNQMLNNNMRNMNNRASRNMGAGNIANIPNQKQLPINMVGKQNTS
QGSQMNHQGPPPPQQQQGQGSPQQQQTQQKSPQQMQQQVPPNGNFKFTSQARNRMEMPNK
NANKVNAINNMNVNFNNSSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGM
MLEMDNSELLILLENEEQLKKKIDEALVVLQKAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgttggctactggaacgaatattatgcacccaagcttttccaccgcctccctgtatgta
ggggatctgaatgaggatgtgacggaggcagttctttacgaaattttcaacacagttgga
catgtgtcatccattagagtatgtcgagatagcgtaacaagaaaatcactgggttacgca
tatgtgaattaccataacttagcagatgcagaaagagcactggacacgttaaactataca
aatataaaaggacagccagcaagactcatgtggagtcatagagacccatcgttgagaaaa
agtggtgcaggtaatattttcgtgaagaaccttgacaagtctatagataataaggctcta
tttgatacgttcagtatgttcggaaatattttgtcgtgtaaggttgccacggacgaattt
ggaaagagcaaaagttatggatttgttcattatgaagatgaggagagtgcaaaggaagcc
atcgaaaaggtaaatggaattcagttaggatcgaaaaatgtatacgtgggccattttatt
aaaaggtcggaaagggctacgaacgataccaagttcaccaacctgtatgtgaagaatttt
ccagacagtgttactgaggcacacttgaaacaactgttcagtccatatggagaaattaca
tccatgattgtgaaaacggacaataagaatagaaagttttgttttatcaattatgctgat
tctgaaagtgcaaaaaatgctatggaaaatctgaatggaaagaaaatcaccgacgatggt
caaatagaccatacgtacgatgcgaaaaaggaagaagcggagaatgcaaatgcaaacaac
gggaccaacaatggtattgccacaggtgcagatgctaatggcgtagaaggagaagtcggt
aaaggaacaacagtcgatggaaagggagacaacaaagtttctactgctggagatacagga
aaaagtggagaagaaactgaaggaggagccaacaccactggggcaacctctgaatcagtg
aaagggaatgaaggtaacaaggtcgaatctgatgataaggctaatgaaacatcaggggtc
acttcgacagacggagcttccaacgtgaaggaagacggagcaagttctatcgcagccaat
gcagccgcacagggagaaagcacaaatggaattaataaaaaggatagtggttcggagagc
gcagacagtcctaatatcctatacgtaggacctcatcagtcgagagccagaagacatgcc
attctgaaggcgaaatttgataacctgaacatggaaagtaaaaacaaacaccagggtgta
aatctgtatataaaaaacttggacgatgcgattgacgaccaaacattgaaagaactcttt
gaaccatatggaacaatcacatccgcgaaggttatgagagacgacaaggaacagagcaaa
gggttcggatttgtctgcttcgctcaacaagaagaagcaaacaaagcagttacggaaatg
cacctgaaaattattaacggaaaacccttgtacgttggtttagcagaaaagagagagcaa
agattatctcgactacaacaacgattccgcatgcaccccataaggcaccacatgaataat
gcactaaattctcctatgcagtaccccaatccgcagtccccacagttgcagtttaatcag
aacacattaaattatggaagaccagtgttaactccatttaatcagaataaccttatttcc
tggagacatcagcaagccgcacaacagcaagttgttcatcagcaggcagcccaacagcaa
ctaaatttcaatgcaaatttaagagggcaaatgaaccaaatgagattctacacacaagga
ggagcgaacatgatgaacaacagtatgaatcagaataaggtgaacgcccaactgcatcca
ggacaccaatatcccaatgcattaggacaaggaaatccacaacaaccaaatttaagtgca
ccaggacaacacaacaacaaccaagctatgcaacaacaaccagcgaacaaccaaatgctg
aacaacaatatgaggaatatgaacaacagagcgagtagaaatatgggagcaggaaatata
gcgaatattccaaaccagaagcagctacccattaacatggtaggtaaacagaacacttca
caaggcagtcagatgaatcatcagggaccacctccaccacaacaacaacagggacaagga
tcaccacaacaacaacagacacaacagaaatcacctcaacagatgcaacaacaggtacct
ccaaatggaaactttaaattcacatcacaagcaagaaaccgtatggaaatgccaaacaag
aatgcaaataaagtaaatgcaattaataacatgaacgtgaattttaacaacagctctact
ttaaccgctgcagcattggcctctgcacctccttccatgcagaaacaagttttgggtgaa
aatttatttccgctggttgcgaactaccacccaaccttagctggaaaaatcactggaatg
atgttggaaatggacaactccgagctccttattttgctggaaaatgaggagcagctgaag
aagaaaattgacgaggctcttgtcgtgctgcagaaagccaagtag
DBGET
integrated database retrieval system
