Plasmodium knowlesi: PKNH_1451000
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Entry
PKNH_1451000 CDS
T01094
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1451000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1451000
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PKNH_1451000
Spliceosome [BR:
pkn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PKNH_1451000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
WHD_HA2
Helicase_C
AAA_22
HA2_C
AAA_19
AAA_16
AAA_7
NAT10_TcmA_helicase
ResIII
T2SSE
AAA_30
ABC_tran
nSTAND3
nSTAND_NTPase5
Cas3-like_C_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
7323175
NCBI-ProteinID:
XP_002262388
UniProt:
A0A5K1UW85
A0A384LLC0
LinkDB
All DBs
Position
14:complement(<2210527..>2213709)
Genome browser
AA seq
1060 aa
AA seq
DB search
MRMREKAEAHKRPIEFEDDETKKKIRTEDDESLKDEKIRENSLHPLHLEHRKGRNKNLKN
DAEYVELLKKDARRKYLKEREREKLDVTKKLLDDELLYSTIKLEGKELKELELSKRIYDI
AKENIKLREKLKENYYLFQEDLDKFDATNKGTDVDATQVREGKGDPSAYNYDEQIINKGI
LKFGSGGAVSAGLKNDFVFEDDLANRKSIKREESEEKRKYEREKEKKKRKKEKERSDSGS
AVDSGSGRGRKHRGEKKRIDKSANSSGRTHTYRGLHKGRSEHRERDDRGVQEVCEEESRT
RETSSRGKKRKKGSEHGGEHSGDGDDRKRNENGLTDVVEFVHLDSFYGMDEKERELQRLF
EDIKRKKEKKMKKIIDDRKRLPIFSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLHE
CKYHLYGNIVCTQPRRIACIAIANRVADEMNVKVGKEVGYVIRFQNKTSESTKIVYMTDG
MFLRLLLYNPTLDDISVLIIDEAHERALHTDVILPIVKDICNFREDIRIIISSATLDAEK
ISTYFNCAPIFYVPGRKYNVDIYYTINNESNYLSAIVITILQIHVTQEKGDILVFLPGQF
EIELVQQELENKLIELAPRFRNMIILPIYSSLPVEQQARIFEDVADEDHGKGDAPDSGNP
GAEQPDGASSTNTNIQTNELAPADQPKAIMRRGTRKIILSTNICETSITIDNIVYVIDSG
LCKQKVYNPNSGIESLVTLPCSKASVNQRTGRAGRKQDGKCFRLFTKKSFIDLNDNSVPE
IQRCEVSSMILLLKSLGMDDIINFDFLDPPSPVVIIKGLELLYSLGALNDEGNLTKTGRK
MAEFPTDVKSSKMILAASEKYNCVEEILCITAMLTHANNIFYVQKGKEKEAENVKKMFTI
EGGGDFLLLLNIYKQCEENNFSTSFCYDHFLQYHTMIKIKDIKTQLVSICEKIDLPSSSC
GIQNHDAICNLKKCIVSAFFTNAALPVNKNELKIIKLNQVVSIYPSSVLAKKNIMEEHKN
ACIIFYEVIKINKSYIRHNIPVTKDMLYEIASFYFLSKIA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgagggaaaaggcggaagcacacaagcggcccatcgaattcgaagatgatgaa
acgaaaaaaaaaatccggacagaagatgacgagtcgcttaaggacgaaaaaatcagggaa
aactcattacaccccctacatctggaacaccgaaaaggtagaaataaaaacttaaagaat
gacgcagaatatgttgaattattgaaaaaagatgcccgaagaaagtacctcaaagaaaga
gagagagaaaagctagatgtaacgaagaagctattggatgatgaactcctatatagtaca
attaaattggaagggaaggaacttaaagaattggaactgtccaaaagaatctatgatata
gctaaagaaaacataaagttaagagaaaaactaaaagaaaattattaccttttccaggaa
gacttggacaaatttgatgcaacgaacaaaggcaccgatgttgatgcgactcaagttagg
gaaggaaagggagatccttccgcctacaactatgatgaacagataatcaacaaagggatt
ttaaaattcggttcggggggggcggtaagtgcaggccttaagaatgactttgtgttcgag
gacgacttggcaaatcggaagagcataaagagggaggaatctgaagagaaacgcaagtac
gaaagggaaaaagaaaaaaaaaaaagaaagaaagagaaggaaagaagcgacagtggtagt
gctgttgatagtggcagcggcagggggcgaaagcataggggagagaagaaacgcatagac
aaaagcgccaattccagtgggagaacccacacatataggggcctccacaagggtcgtagc
gaacaccgagagagggatgatcgtggcgtgcaggaagtctgcgaagaggaaagcagaacg
cgagagacgtcaagcagggggaaaaagaggaaaaagggaagcgaacatgggggtgaacat
agcggcgatggcgacgatcgcaagcggaacgaaaacggcctgacggacgtggtcgaattc
gtgcacctggacagcttctacggaatggatgaaaaggaaagggaattgcaaagactgttc
gaagacattaaaaggaagaaagaaaagaaaatgaagaaaataatcgatgacaggaagagg
ttacccatatttagttacagatatgatattttaaaggccatcaaaaacaataaaatccta
attctagttggagaaacaggaagcggaaagagcacacagttaacgcagtacttgcacgag
tgtaagtaccatctgtatggaaacatagtctgcacgcagcccagaagaatcgcatgtata
gccatagcaaatagggtagccgatgaaatgaatgtaaaagtgggaaaggaagttggctac
gttattcgatttcaaaataaaacgagtgaatcaacaaaaatcgtgtacatgacggatgga
atgttccttcgtcttttattgtacaatccaacattggacgacatttcagtgttaataatt
gatgaagctcacgaacgggctttacacacagatgttattcttcctatagtaaaggacatc
tgcaattttagggaggacataaggattatcatatcgtctgccactctagacgccgagaaa
atttccacctactttaattgcgcccccatattttatgtgcccggtagaaaatacaacgtt
gatatttactacactataaataatgagagtaattatttatcagccattgtgattaccatt
ttgcagatccatgttactcaggagaagggagacattttggtctttcttcccggtcagttt
gaaatcgagctggtgcaacaggaactggaaaataagcttatcgaactagccccaaggttt
cgcaatatgattattttgcccatttattcatcccttccagttgaacagcaagcgcggata
ttcgaggatgtggcggatgaggatcacgggaagggagatgccccggacagcggcaaccct
ggggcggaacagcctgacggggcatcttctaccaacacgaacatccaaacaaatgagctt
gcaccagccgatcagcctaaagcaataatgcggagaggcaccagaaaaattattctatca
acaaacatttgcgagacgagtatcaccatagataacatcgtgtacgttattgattcaggt
ctgtgtaagcagaaagtgtacaatccaaactcggggattgagtccctggtaactttacca
tgctctaaagcatctgtgaatcaaagaacaggtagagcaggtagaaaacaagatggaaaa
tgttttcgcctcttcaccaaaaaatcattcattgacttgaatgataactcagttccagaa
attcaacgatgcgaagtcagcagtatgattttattactaaaaagtctaggcatggatgac
ataataaatttcgattttttagaccctccttctcccgtggtgataataaaaggcctagaa
cttctatactcattgggtgcactaaatgatgaggggaacttaacgaaaacggggaggaaa
atggctgaatttcctacagatgtgaagtcaagtaaaatgattctagcagcatctgagaaa
tataattgtgtggaagagattttatgtattacagctatgctaacacatgcaaataacatt
ttctacgttcaaaaaggaaaggaaaaagaggcggaaaatgtgaagaaaatgtttaccata
gaaggtggtggagattttctacttctcctaaatatatataaacagtgcgaggagaacaat
ttctccacgtcattttgctacgaccactttttgcagtaccatacgatgataaaaattaag
gacatcaaaacacagttggtgagcatctgcgagaaaattgatttgcccagtagctcctgc
ggtattcagaatcatgacgccatatgcaacctgaagaagtgcattgtcagtgccttcttc
accaatgctgccttgcccgttaataaaaatgaacttaaaattataaaacttaatcaggtc
gttagcatataccccagctcggtgcttgcgaagaaaaatatcatggaggaacacaaaaat
gcttgcatcattttttacgaagttattaagataaataagtcttacatacgtcacaacatc
cctgttactaaggacatgctctacgagatcgcgtcgttttacttcctcagcaagattgcc
tga
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