Plasmodium knowlesi: PKNH_1454200
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Entry
PKNH_1454200 CDS
T01094
Name
(RefSeq) splicing factor 3B subunit 3, putative
KO
K12830
splicing factor 3B subunit 3
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1454200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkn03021
]
PKNH_1454200
03041 Spliceosome [BR:
pkn03041
]
PKNH_1454200
03036 Chromosome and associated proteins [BR:
pkn03036
]
PKNH_1454200
Transcription machinery [BR:
pkn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PKNH_1454200
Spliceosome [BR:
pkn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PKNH_1454200
Complex B
PKNH_1454200
Complex C
U2 SnRNP specific factors
PKNH_1454200
Chromosome and associated proteins [BR:
pkn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PKNH_1454200
TFTC complex
PKNH_1454200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
7323209
NCBI-ProteinID:
XP_002262422
UniProt:
A0A5K1V5V8
A0A384KTF6
LinkDB
All DBs
Position
14:<2377152..>2381619
Genome browser
AA seq
1276 aa
AA seq
DB search
MPVLYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIVSKDIFG
IIRCLQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEY
IAVDPKGRALMICAIERQKFVYILNRDNKEQLTISSPLDAHKSHTICHDVVGMDVGFENP
MFASIEQNYEMYDKQVTNTTEIDACTRKTLLCLWEMDLGLNHVIRKHTLPIDMSAHLLIP
IPGGQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSTVHRIRKFFF
ILIQSEYGDLYKIEMDHQDGVVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQ
FSGIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANS
PQIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKYIWTIKKDNASDYDGYIIVSFEG
STLILEIGETVEEVVDTLLLTNVTTIHVNILYDNSLIQVHDTGIRHINGKVINEWVPPKN
KQVKAATSNATQIVISLSGGELIYFEIDESHSLVEIFRKSLNVEILCLSIQEVEENKVRA
NFLAVGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICISEMCELGNDKERKLLFLN
IGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNPALLVLCEKTYLCYVHQ
GKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILHLSFTPR
KIVPLPFPSLFYDHDTSIEIERQKNIRMLAIIEADHNAYDENTLREIQRALKGIQLEGEE
HTGSNGPSHSDGRDLQDNLPNGTKNQGHSKNQLLEQEENEQMENASSRQNGEVDHNDGEE
DEEADDEEEELLYDRIGTVKAGPGKWGSCIKIIHPVSLQTIDKISLEMEEAALSVCACEL
EALHCLIVGTTTNLSLKNRTATTAALRVYTYDINYKLNLLHITPVEDQPFCFSPFNGRLL
ASVGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVSGDRIFASDIRESVLVFFYDANMNA
LRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVLRVPEEAKQEEYGISNKCWYGGEMM
AGSNKNRRLEHIMNFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELEL
TQHLEIILRTENPPLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPYDIQRKVAADLERT
PDDILRKLEDIRNKIL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgtaccacctgacactgcagaagcccacggccatcaccaaaatcgcgtat
ggaaatttctcggggccaaaggtgcacgaaatcgtggtgtccaagggacaggtgttggag
ctcctaagagcggacaagcagggcaagctcaacctgattgtgtccaaagacatcttcggg
ataattcgttgcctccagacatttcgcctcaccggtagcaacaaggattatgtagttatt
ggtagcgactcagggaggttagtgatccttcagtttagcaacgagaaaaatgattttgtg
agagtgcactgtgaaacttacggcaaaagtggccttcgaaggataatcccaggagagtac
atagcagtggacccaaagggaagagccctcatgatatgtgcaatagagagacagaaattt
gtatacatactaaatagagataacaaagaacaactaactattagcagcccattagatgcg
cacaaatcacataccatatgtcatgatgtagtcgggatggacgttgggttcgagaaccca
atgtttgcatctattgaacagaattacgaaatgtatgataagcaggtgacaaatacaact
gagattgatgcatgtacaaggaaaacactcctatgtctgtgggaaatggacctaggtcta
aatcacgtgattagaaaacatactctcccgattgacatgagcgcacatttgttaattcct
attccaggagggcaacaaggaccaagtggagtcatcgtctgttgtgataattacttggtt
tacaaaaaagtcgaacacgtagatgtgtattgtgcttacccaaggagacttgaaacagga
caagagaaaaacatttctatcgtgtgtagcacagttcacagaattaggaagttcttcttc
attcttatacaatccgaatatggtgatctctacaaaattgaaatggatcatcaagatgga
gttgtaaaagaaattacctgcaaatatttcgacaccgttccagtagccaacgctatatgt
gtgatgaaatctggatcccttttcgtagcagccgaatttggaaaccacttcttttatcag
ttttcaggaataggagatgatgataatgaagctatgtgcacgtcgaaacatccctcaggt
agaaatgctatcattgcctttaggacgaagaaactcacaaatctatttctcatagatcag
gtgtattctctgtcgcccattttggacatgaaaattctggacgcgaagaatgccaatagc
ccccaaatttatgccctctgcggaagaggaccgagatcttcccttcgtatcttgcaacat
ggattgagtatagaagaactagcagataatgaactccctggaagaccgaaatatatttgg
actattaaaaaagacaacgcaagtgattatgatgggtacataattgttagttttgaaggt
agcacacttattttagaaatcggtgaaacagtggaggaggttgtagataccttactccta
acaaacgtaacgaccattcatgtgaatatactttacgataactctctcattcaagtgcac
gatactggtataagacacataaacggaaaggttataaacgagtgggtacctcccaaaaat
aaacaagtgaaagcagccacatcaaatgccactcaaattgtaatttcactcagtggagga
gagttaatttatttcgaaattgatgaatcacatagtttagttgaaatatttagaaaaagc
cttaacgtagaaattttgtgtctttctatacaagaggtagaggagaataaagtgagggcc
aacttcctagctgttggttgcttggacaatgttgtgaggttactttccatcgaaaaggaa
aaatattttaatcagttgtccacctttattttgccaaataattcatcagcacaagatatt
tgcatatctgaaatgtgtgaattgggtaacgacaaagagaggaaattgctcttccttaac
attggactgaataatggagtacttttgcgaagtgtggtagatcccattacaggcacactg
accaaccattactcaaaatacttgggtgcaaaaaatgtaaaaatatgtccagtccatgtg
aagaaaaacccagctctccttgttctatgcgaaaagacgtacttatgttacgttcatcag
gggaaatatatttactctcctttaaattatgatattttagaatacgcatcgtctttccat
tcggaacagtgctccgatggatacgttgcaatatcgggaagtagtttgcgtatcttccgt
ttctatcgcttgggggaggtgttcagtcaaaatattttgcacttatcatttacgcccaga
aaaattgtaccgctccctttcccttccctcttttatgatcacgacacgtctatcgaaatt
gagcgacaaaagaatatacgcatgctggctatcatcgaggccgatcataatgcgtacgac
gagaataccctgcgcgaaattcaaagggcactcaagggtattcagctcgaaggggaagag
cataccggttcgaacggaccatcccactctgatgggcgtgatctgcaagacaacctcccc
aatgggacgaaaaatcaaggacattcaaaaaatcagctcttggagcaggaggaaaacgaa
cagatggaaaatgcatccagtcgccaaaacggagaagtggaccataacgatggggaggaa
gatgaagaagcggatgatgaggaggaagaactcctctacgatcgaataggaaccgttaag
gcaggtcccggcaagtggggatcctgcataaagataattcacccagtcagtttacaaacc
attgataaaatttcactcgagatggaagaagcagccttaagtgtctgtgcctgtgagttg
gaagctctccattgcttaatagttggcaccacgacaaacttgtccctaaaaaatcgaacg
gctacaacagcagctctgcgtgtctacacatacgacatcaactacaaacttaatctcctg
cacataacgccagtagaagatcagccattctgtttctctccatttaatggaaggctccta
gcttctgttggaaacaagctaagaatatatgcactcggaaaaaaaaagttactaaaaaaa
tgcgaatataaggatatccctgaggcgatcatctccattaaggtgtctggtgatcgtatc
ttcgcctctgacataagagaatccgtcttggtttttttttacgatgccaatatgaacgcc
ttaaggctaatttcggatgacataattccaaggtggatcacctgctccgagattctggac
catcacacgattatggcggcagataaattcgactccgtctttgtgctccgggtgccggag
gaggccaagcaagaggagtatggtatttcgaacaagtgttggtacggaggtgaaatgatg
gccgggtcgaacaagaacaggaggctcgagcacatcatgaacttccacgtgggagaaata
gtcacgtcgctgcagaaggtgaagttgtcccccacgagtagcgagtgcataatatattcc
actatcatgggaacaataggggcgtttatcccgtacgataataaggaggagctggagctg
actcagcacctggaaatcattttgaggacggagaaccccccgctgtgtggacgggagcac
atattttttcgttcctactaccaccctgtccagcacgtcattgacggagatctatgcgag
caattttccagtctgccatacgacattcagaggaaagtggcagccgacttggagagaacc
ccagatgacatcctaagaaagttggaagacattcgtaataaaattctttaa
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