Plasmodium knowlesi: PKNH_1455600
Help
Entry
PKNH_1455600 CDS
T01094
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1455600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_1455600
03041 Spliceosome [BR:
pkn03041
]
PKNH_1455600
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PKNH_1455600
Spliceosome [BR:
pkn03041
]
Complex B
Other components
Prp19-related factors
PKNH_1455600
Complex C
PKNH_1455600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
7323232
NCBI-ProteinID:
XP_002262445
UniProt:
B3LD14
LinkDB
All DBs
Position
14:complement(2460378..2463781)
Genome browser
AA seq
941 aa
AA seq
DB search
MELYGELYDCDELLDEYNADYGDSKRPWGEARMGEDTTAQCVEDEAHVKNIEVDIKNNQK
NVSTQYLFLYINTFKQKNIRSEKTLYVVNFYDIHMKNDDKNVLETEKNIVEYCFENVSRA
KMRGKRDHQDGDDDDDEDDDDTVTTRQHCKYYLFKIYETILKYFPFSFKLWYHYLKDRIE
MLSGLYYDQKEEYEDVNRVFEECLLYMYHFKAIYILYIQFLFLQRKVQNIRIIFNLALQN
ITLNQHEDLWEYQLKYNKNIKNKLINYEYIKRYVTIYPENIVHLFNHYVKYKMCKHALNT
FFYMISCDDQENLQLEEKSIYDLYRELFHLISSRKILHNDVLVSLRKNIDTFKRYENVTS
IYTLLANSFVYEGRWNKAMDAYEEGILECYTVNDFSVLFEGYIETMKILIELKMQREEGK
EITNNSGEETDEDNFDHLPPSGNDCADESVVDLYMDKINYLLDKRKVFIADIKLKNNQKN
VYVWLGKIDAVETTEEKVDLYNRCLKHFEDGDYEGRISDVYISYAYFHYNRNEYEKAVNV
FNRSVRYHNFKTLNEIASVYCSWIEVELLEGNFKKALRIARLVIDLSNGGGRGRSISRMN
NYTGANANEESDSLIGRNIPMLGDDHFRSLNQNFCLLNNVKLACLILDLEINYGTIETSI
NLFDILYHKKIITVKMVLSFANYLYENKYFYECFKTYEKAISIFHYPYLYPVYVHYISKY
VQRYKDKNISYVRELYKQAIYGVDEKTFIPKEFAKNIFLMYASFEEHYGFLKRSLSIYKE
AVPFLSEPDKVKFYKVFISKVSKSYGVHKAREAFEEAIQTLKDDDAREICLLYIDMEYKL
NEYDRVRALYIYTAQFTNPSVHLSFYQDWREFEALHGNEHTFREMIRIKRSVLSLFSNAR
TANKPLGMLEDDDVNGLENTKRKLQEMIDNEENAQKKVKVG
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtacggagagctctacgactgtgacgaattgcttgacgaatacaacgcagac
tatggggattcaaaacgaccctggggggaagcccgcatgggtgaggataccaccgcccag
tgtgtagaagacgaagcgcacgtgaaaaacatagaggtagatataaagaacaaccagaaa
aacgtgtcgactcagtacctatttctttacatcaatacgtttaagcagaaaaacattagg
agtgaaaaaactctgtacgtagtgaacttttacgatatccacatgaagaacgacgataag
aatgttctggagacagagaagaacatagtggagtattgctttgagaacgtttcgagggca
aaaatgaggggcaaaagggaccaccaggatggtgatgatgatgatgatgaagatgatgat
gataccgtaaccacgagacaacactgcaagtattacctgtttaagatctacgagacgatt
ttgaagtacttccccttcagcttcaaactctggtatcactacctaaaggatcgcatagaa
atgctgagtggactttactatgaccagaaggaggagtatgaagacgtgaatcgagtgttt
gaagagtgcctcctatacatgtaccacttcaaagcaatttacattttgtacatacagttt
ttgtttctccaaaggaaggtgcaaaacataaggattatttttaaccttgccctacaaaac
atcaccctgaatcagcatgaagacctttgggagtaccaactaaaatataataaaaatata
aaaaataaactaataaactacgaatacattaaacggtacgtaacgatttatccggagaat
attgtccatctatttaatcactacgtgaagtacaaaatgtgtaaacatgctctgaataca
tttttctacatgatcagttgtgatgaccaggagaatcttcaattggaagaaaaatccatt
tacgatttgtatagagagttatttcacctaattagttcacgaaaaatattacacaacgat
gtgctagtatcattaaggaaaaacatcgacacttttaagcgatatgaaaatgtaacttcc
atttatacgttgttggcaaatagcttcgtgtatgagggtcgttggaacaaagccatggat
gcctatgaggaaggaattttggaatgctacacggtgaatgatttttctgtgctctttgag
gggtacatagaaacgatgaagatacttattgagttgaagatgcagagagaagaaggtaag
gaaattacaaataacagcggggaggagactgacgaagataattttgaccatctccctccc
tctggcaacgattgcgcggacgaatccgtggtggacctatacatggacaaaataaattac
ttgctagacaagcgcaaggtgttcatagcagatattaaactgaagaacaatcagaagaac
gtctatgtgtggttaggcaaaatagatgcagtggaaacgacggaagagaaggtggatctg
tacaacagatgcttaaagcatttcgaagatggagactatgagggtcgaatcagtgatgtg
tacatcagttatgcttatttccactacaaccgtaacgagtatgagaaagcagtgaatgta
ttcaatagatctgttcgttaccataattttaaaacgttgaatgagattgcaagtgtgtac
tgttcctggatagaggtagagttacttgagggcaattttaagaaggccttgcgcatagcc
agattggttatcgatctcagtaacggtggggggcgaggaagaagcattagcaggatgaat
aactacacaggggcaaacgcaaacgaagaaagtgattcactcattggaagaaacatacca
atgctgggagatgatcattttagaagtctaaaccaaaacttctgccttttaaataacgta
aagttagcttgtctcatcctagatttggaaataaattatggtactattgaaacgtcgata
aatctgtttgatatactgtaccacaaaaaaatcatcacggtgaaaatggttctctccttt
gccaactacctctatgaaaacaagtatttttatgaatgcttcaagacgtatgagaaggct
atttccatcttccattatccttacctgtacccagtgtacgtacactacataagtaaatat
gtgcagcgttacaaagacaagaatatttcctatgtgcgtgagctgtacaaacaagccatt
tatggagttgatgaaaaaacatttatcccgaaggagtttgctaaaaatatattccttatg
tatgcttcctttgaggagcattatggatttttgaagagatccctttccatttataaggaa
gcggttcctttcctctccgagcctgacaaagtcaagttttacaaagtcttcatttcgaag
gtgtccaaatcgtacggagtacacaaggcaagggaggccttcgaagaggccatccagact
ctgaaggacgacgacgcgcgtgaaatatgcctcctttatatagatatggagtacaagctg
aacgaatatgatcgcgtccgggcgctttacatttacacagctcagtttaccaacccgtct
gtgcatttgtccttttatcaggactggcgagaatttgaagcgcttcatgggaacgagcac
accttcagggaaatgataaggatcaagaggagcgtcctaagcctgttctcaaacgcgcgc
accgccaacaagccattgggtatgttggaggatgatgatgtgaacggcttggagaatacc
aagagaaagctgcaggaaatgattgacaatgaggagaacgctcagaaaaaggtgaaggta
ggttga
DBGET
integrated database retrieval system