Pontibacter korlensis: PKOR_04290
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Entry
PKOR_04290 CDS
T03841
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pko
Pontibacter korlensis
Pathway
pko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKOR_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_04290
Enzymes [BR:
pko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PKOR_04290
DNA repair and recombination proteins [BR:
pko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKOR_04290
Prokaryotic type
PKOR_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Nuf2
EF-hand_14
Motif
Other DBs
NCBI-ProteinID:
AKD02480
UniProt:
A0A0E3ZEU9
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All DBs
Position
1050449..1051540
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AA seq
363 aa
AA seq
DB search
MSSAPHAHFAQTLISWYGRHKRSLPWRDTTNPYFIWLSEVILQQTRVAQGLPYYERFIAT
YPTVEDLAAAPQDEVLRLWQGLGYYSRARNMHHTAQLVVEKYGGRFPDKYEELIKLKGVG
SYTAAAIAAFAFREQVAVLDGNVFRVLARVFGITDDIAAPSSRKVFQKLADELVPKGEPD
TYNQAIMEFGAVQCTPLMPDCLFCPLQQSCFAFSHGMVQELPVKSKAKAARPRFFHYITF
ELEGRFYLRKRLEGDIWQGLYDFYLYENDSKDLSLEQLLQELQEAGIPVQEAQLQPPQKE
YKHILSHQKITARFYRIKLKADLKDEVLKETRLVPYNVQEIEALPKPVLISSYLKDAKIL
VYL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgcaccgcacgcgcactttgcgcaaactcttattagttggtatgggcgccac
aagcgttctttaccttggcgcgacacaactaatccctactttatctggctttcagaagta
attctgcagcaaacacgtgtggcacaagggcttccgtattatgagcgttttattgctact
taccctacggttgaagaccttgcggcagccccgcaagacgaggtactccggctatggcaa
ggattaggctactactcccgggcccgcaacatgcaccatacggcccaactggttgtagag
aagtatggaggccggtttccagacaagtatgaggaactgattaagttgaagggcgtgggc
agctacactgctgcagctattgcggcttttgctttccgggagcaggtggctgtacttgat
ggaaacgttttccgggtactggcacgcgtgtttggcattactgatgatatagcggcacct
tcgtcgcgcaaggtattccaaaagctggcagatgagttagtacctaaaggtgagccagac
acctataaccaagctataatggagtttggcgctgtacaatgtacccctttgatgccagac
tgcctcttctgccccctacaacaaagctgcttcgcttttagccatggcatggtgcaggag
ttgcctgtaaagtcgaaagcaaaggctgcacgcccacggtttttccactatattactttt
gaactggagggaagattttacctgcggaagcgattggaaggagacatttggcaaggcctt
tatgacttttacctctacgagaatgacagcaaagacttatctttggagcaacttttacag
gaattgcaggaagcaggcatcccggtgcaggaggcacaactgcaaccgccccaaaaagaa
tataaacatattctaagccaccagaaaataacggcccgtttttatcgtattaagcttaaa
gcagacctaaaagatgaagtgctaaaagaaacaagattagtaccttataacgttcaagaa
atagaggctttacctaagccagttttgatcagtagctatttgaaagatgctaagatttta
gtatatttataa
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