Pontibacter korlensis: PKOR_06190
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Entry
PKOR_06190 CDS
T03841
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pko
Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_06190
DNA repair and recombination proteins [BR:
pko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PKOR_06190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
DUF7125
AAA_22
AAA_16
nSTAND_NTPase5
nSTAND3
AAA_24
AAA_5
AAA_14
GvpD_P-loop
NACHT
NTPase_1
DUF7129
Lon_C
SLFN-g3_helicase
DZR
DEAD
ABC_tran
CobU
ATPase_2
zf-RING_10
DUF6248
Motif
Other DBs
NCBI-ProteinID:
AKD02787
UniProt:
A0A0E3UVU7
LinkDB
All DBs
Position
complement(1472357..1473736)
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AA seq
459 aa
AA seq
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MAKIKTSYFCQNCGAQSAKWIGKCPACGEWNTYVEEVVQREEVTPTTAWKVGSSTAQVAN
KPKPIADIRYQEQQRIITQDQELNRVLGGGIVPGSMVLIGGEPGIGKSTLMLQIALSLRG
LKVLYVSGEESEQQIKMRAERLMAQTSDCFILTETGTQNIFKQIELVRPQVLIIDSIQTL
HSSFIEAGAGSVSQVRECTAELLKFAKESGTPVFLIGHITKEGNLAGPKILEHMVDTVLQ
FEGDRHMTYRILRTTKNRFGSTSELGIYEMMGSGLREVSNPSEILISQREDAFSGISIGA
TLEGNRPLLIEVQSLVSPATYGTPQRTSTGFDAKRLNMLLAVLEKRGGYRLGTQDVFLNI
AGGLKVEDPALDLAVCASILSSFEDMSIPNTSCFAAEVGLGGEVRAVNRVENRITEAEKL
GFTDIYISKYNKKGVDLSKFSINIHAYGRLEEVFSSLFG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaataaagacatcatacttctgccagaattgcggggcccaatctgccaaatgg
ataggcaaatgcccggcatgcggcgagtggaatacttatgttgaggaggtagtgcagcgc
gaggaggttactcctaccacagcctggaaagtaggcagcagcacagcacaagtagctaat
aagcccaagcctattgccgatatcaggtatcaggagcagcaacgcatcattacgcaagac
caggaactgaatcgtgtgttgggaggtggcattgtgccgggttctatggtattgataggt
ggtgagccgggtatcggtaaaagtacgctgatgctgcagattgccttgagcctgcgtggc
ctgaaggtgctatatgtaagcggcgaggagagtgaacagcaaataaaaatgcgtgccgag
cgcctgatggcgcaaacctccgactgctttatacttacagaaaccggcactcagaacata
ttcaaacaaatagagcttgtgcgcccacaagtgcttatcatagactctattcagacgctc
cactcctcttttatcgaggcaggcgcgggcagcgtgagtcaggtgcgcgagtgtacggct
gagctgcttaagttcgctaaagagagtggtacgccggtgttcctgatcggccacatcacc
aaagaagggaacttggctggccctaaaatactagagcacatggtagacacagtgctgcag
tttgaaggtgatcgccacatgacctaccgcatcttgcgcaccactaaaaaccgctttggc
tctacatctgaactgggaatctatgagatgatgggttctggcctgcgcgaggtgagtaat
ccatcagaaatcctgatttcgcagcgcgaggatgcttttagcggtatctcgataggtgct
accctggaaggcaaccgcccactgttaattgaggtgcagagcctggtaagccctgctacc
tatggtacaccacagcgcaccagcactggctttgatgctaagcgattgaacatgctgttg
gcggtgctggagaagcgaggcggctatcgcttaggtacccaagacgtgttcctgaacatt
gccggcggtctgaaggtagaagatcctgccctggatctggctgtttgcgcctccatcctg
tcttctttcgaggatatgtctattccgaatacctcctgctttgctgccgaggtaggcttg
ggaggtgaagtacgcgccgtaaacagggtagaaaaccgcatcaccgaagcagagaagtta
ggctttactgacatttacatctctaagtataataagaagggtgtagacctaagtaagttc
tccatcaacatacatgcttatggtcgcttagaagaagtattcagtagcctgtttgggtag
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