Pontibacter korlensis: PKOR_07565
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Entry
PKOR_07565 CDS
T03841
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pko
Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pko03016
]
PKOR_07565
Enzymes [BR:
pko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PKOR_07565
Transfer RNA biogenesis [BR:
pko03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PKOR_07565
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AKD03005
UniProt:
A0A0E3ZFP6
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All DBs
Position
complement(1774811..1775995)
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AA seq
394 aa
AA seq
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MENSTLKLDGVTIKLVEQQENLEEAVRQLSQRKELALDLEFDQNRFTYGFNLCLIQIADE
SGTCYIMDPFAVTDLQPLFELLENSAITKIIHHSNNDILLLDKMGCRIKGVMDTDVAAKI
LNYERSSLATVLKEEFNIEIDKSQQSSNWNKRPLTEAQLYYAAIDVIYLHQIKEKLVDEI
EKLGRLHWLEEENKLLEALTYTEPENPHLKLRNAYKLNFYQQYILKDLFAFREQMGKQFN
KPAPFVISNEALVDLANNPNTDIHEWLNHTKGIHGGLKRSRNEKLLKDALSDAKKGAKEN
NISHDYPTNRWQRPLRTPESEQRKEELTQVQKRLIEKYGEFATRLIINQGLITDYSLSGQ
LRCTKQYATAIVLSTAEELRINLPSPITKGGDES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcaacgctaaaacttgatggcgtaacaataaaactggttgagcagcaggag
aatttagaggaagctgtccggcagctaagccaaagaaaggagcttgccctggacctggag
tttgaccagaatcgctttacctacggttttaacctttgccttatacagattgccgacgaa
agtggcacctgttatatcatggacccctttgctgttacagacctacagccactgtttgag
ctgctggaaaatagtgcgattactaaaatcatacatcactccaacaacgacattctcttg
cttgataaaatgggctgtcgtatcaaaggtgtgatggatacagatgtagcagccaagatc
ctgaactatgaacgctcctcgctggctacggtgctaaaagaggagttcaatatcgagata
gataagtcgcaacagtctagcaactggaataaacgccctctgacagaagcacagctctac
tatgcagcaatagatgttatataccttcaccagattaaggagaaactagtagatgaaatt
gaaaaactaggacgcttacactggttagaagaggagaataagctactggaagcgcttacg
tacacagagcctgaaaaccctcatcttaagctgcgcaatgcctataagctaaatttttac
cagcagtacatcctgaaggatttgtttgcttttagagaacagatgggcaagcagttcaat
aagcccgcacctttcgttatttctaatgaggcattggtcgatttggctaataaccctaat
acagacatacatgagtggcttaatcacaccaagggaatccatggggggctgaagcgttct
cgtaacgagaagctgcttaaagatgctctaagtgatgctaaaaagggtgctaaagagaat
aacattagccacgattaccctaccaatcgttggcaacgcccactgcgcacccctgaatct
gagcagcgcaaggaagagctaacgcaggtacaaaagcgacttatagaaaagtacggagag
tttgccaccagacttattatcaaccaagggctaattaccgactacagccttagcggccag
cttcgttgcacaaaacagtatgccactgctattgttttaagtacagcagaagagcttaga
atcaacttgccctcccccataaccaaaggaggagatgagagctaa
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