Pontibacter korlensis: PKOR_12735
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Entry
PKOR_12735 CDS
T03841
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pko
Pontibacter korlensis
Pathway
pko00300
Lysine biosynthesis
pko00470
D-Amino acid metabolism
pko01100
Metabolic pathways
pko01110
Biosynthesis of secondary metabolites
pko01120
Microbial metabolism in diverse environments
pko01230
Biosynthesis of amino acids
Module
pko_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PKOR_12735
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PKOR_12735
Enzymes [BR:
pko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PKOR_12735
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKD03827
UniProt:
A0A0E3UX05
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All DBs
Position
complement(2950443..2951585)
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AA seq
380 aa
AA seq
DB search
MLNLNPEQLKQHATPFYVYDLNLLRQTLQSAQQEAEKYNFHVHYALKANANAPVLEQMRQ
HGFGADCVSGNEVKAAIENGFSPKEVVFAGVGKSDEEINYALDQDIFCFNCESKHELEVL
NELAEQKNTVARVALRINPNVNANTHKYITTGLEENKFGINAWELESVIELLQQLKHVEL
IGIHFHIGSQITDLTVFKNLCTRVNEFQEWFLARNIELEHINVGGGLGVDYYHPEENPIP
DFAAYFSLFNQFLELRPGQQVHFELGRALVAQCGTLISRVLYIKSGVTTNFAILDAGMTE
LIRPALYQSYHKIENLTSEKQEVRYDVVGPICESSDCFGKAVMLPETNRGDLIAIRTAGA
YGEVMASAYNLRDKAQAIYV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaccttaacccggagcagctaaagcaacatgctactccgttttatgtatacgac
ctgaacctattgcgccagacacttcagtctgcacagcaagaggctgagaagtataatttt
catgttcactatgcccttaaagccaatgcaaatgctcctgtacttgagcaaatgcgccag
catggctttggtgccgattgcgtgagcggcaatgaagttaaagcggctattgagaatggt
ttttcgccgaaggaggttgtatttgcgggcgtgggtaagtccgacgaggagattaattac
gccctggatcaggatattttctgctttaactgtgagtcgaagcacgaactggaggtactg
aacgaactggcagagcagaaaaacactgttgcccgtgtagcgctacgcattaacccaaac
gtaaatgccaacacgcacaagtatatcaccacaggcctggaggagaacaagtttggtatc
aatgcctgggagttggagagtgtaatagagcttctacagcagctaaaacatgtagagctg
atcggtatccactttcatattggctcacagatcaccgatctgactgttttcaaaaacctg
tgcacacgcgtaaatgagtttcaggaatggttcttggctcgaaacattgaactggagcat
atcaacgttggcggaggccttggtgtggattattaccatccagaggagaatccaatacct
gattttgctgcttatttttcactattcaatcagtttctggagctaagaccaggacagcag
gttcattttgaattaggccgtgcactggtagcacagtgtggtacgcttatttcgagagta
ctttacatcaaaagtggcgtaactaccaattttgcgatactcgatgctggtatgacagaa
ttgatccgccctgcgctatatcagtcttatcacaagattgagaaccttacaagcgaaaag
caagaggttcgttacgatgtggttggtccaatctgcgaatcgagcgactgcttcggtaag
gcggtaatgctaccagaaacgaaccgcggcgacctaattgccattcgtacagccggagct
tatggcgaggtgatggcttctgcttacaacctgcgcgacaaagcccaagcgatttatgtt
taa
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