Pontibacter korlensis: PKOR_13040
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Entry
PKOR_13040 CDS
T03841
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pko
Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pko01002
]
PKOR_13040
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pko01011
]
PKOR_13040
Peptidases and inhibitors [BR:
pko01002
]
Cysteine peptidases
Family C82
PKOR_13040
Peptidoglycan biosynthesis and degradation proteins [BR:
pko01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PKOR_13040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AKD03869
UniProt:
A0A0E3ZG96
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All DBs
Position
complement(3029406..3030557)
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AA seq
383 aa
AA seq
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MHYFLHILLLIFWLADGYAQQKQYMPYSKKRLQQAIVQYQNIVLTDNWHTFPDTLLLRPG
DTSPFVPLLQENLLLTGDLPLDSATDGAVYVHRITSAVQKFQYRHGLKPDGIIGSGTVVA
LNIPPQQRLQQLHINMLRFDSTLTHLRAPYAIINLPDYTMQVVDSGKTLLRMRVIVGKPS
LKTYPIHSELNMVVLHPYWYVPTSIAVNEIVPILRRSPNYLYKKRMRLEQETSKGWVQVN
PWRVNWRDVNRANFNYRIVQLNGTGNELGKVKFPFPNSLPQYLHDTPKKEFFKYPDRAFS
HGCIRLEKPVELAEYLLKCGSGYTSGDIAKLWRQQKPNHYIRVKNPVPLHIIYLTSWVDE
KMRVHFRNDVYGFDAVSGLTLQK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcactattttctgcacatactccttctcatattttggttggcggatggttatgcgcag
cagaagcagtatatgccatacagtaaaaagcggctgcagcaggcaattgtacagtatcaa
aacattgtacttactgataactggcatactttccccgacacacttctactgcgcccaggc
gacaccagcccttttgtacccctgctacaagagaaccttcttcttaccggagaccttcct
ttagactccgctacggacggagcagtgtacgttcacagaattacatcagcagtgcaaaaa
ttccagtaccgacatggcctgaagccggatggaattataggttctggtactgttgtggct
cttaatataccacctcagcaacgcctgcaacagctccatatcaacatgctccggttcgat
tctacacttactcacctgcgtgcaccctatgccattatcaacttacctgattacaccatg
caggtagtggacagtggcaaaacgctgctgcgtatgcgcgtgattgtaggcaagcctagt
ttaaaaacatatccgatacactctgaactgaacatggttgtactgcacccctactggtat
gtgcctacctctattgcggtaaacgagatagtacctattcttagaagaagcccaaactat
ctttataaaaagcgtatgcgcctagagcaagaaacgtctaagggttgggttcaggtaaac
ccatggcgagtaaactggcgtgacgtaaacagagccaactttaactatcgtattgtccag
ctcaacgggacgggcaatgaactgggcaaagtgaagtttcctttcccgaacagcctgccg
cagtatctccatgatacacctaaaaaagagttttttaagtaccctgaccgtgcctttagc
cacggctgcatccggctggagaagcctgtcgagttagctgaatacctcttaaaatgtggc
tccggctacacatctggggacatagctaagctttggcgccaacaaaagcctaaccattat
atcagggtcaaaaatcctgtgcccctacatatcatctatctgacatcctgggtagatgaa
aaaatgcgtgtacactttagaaacgacgtgtatggatttgatgctgtatccgggctaacg
ctacagaagtaa
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