KEGG   Pontibacter korlensis: PKOR_16715
Entry
PKOR_16715        CDS       T03841                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pko  Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:pko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pko03032]
    PKOR_16715
   03400 DNA repair and recombination proteins [BR:pko03400]
    PKOR_16715
Enzymes [BR:pko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PKOR_16715
DNA replication proteins [BR:pko03032]
 Prokaryotic type
  DNA Topoisomerases
   PKOR_16715
DNA repair and recombination proteins [BR:pko03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PKOR_16715
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AKD04429
UniProt: A0A0E3ZFQ5
LinkDB
Position
3895359..3896447
AA seq 362 aa
MAKKKEIHELYADPSRSAAWAGLRYTSDEGPGYTRKKAGKGFYYLDNKGERVTDEKTLER
LNALVIPPAWTAVWICKSPKGHLQATGRDTKGRKQYIYHPQWQQARSLTKFGRMIEFGYS
LPKLRERLQQDIASRNLDRRKVTALVLTLLDNALIRIGNRSYAKSNKSYGLTTLRDKHVR
IDGSNIKFSFVGKKGVAQEIDLKDRRLARLVKKCKDIPGYDLFQYFDENGERQTLESGDV
NEYLREATEHDFSAKDFRTWGGTVRMVECLENVLEAEPDLDKEKAIKAAVKEVAKGLGNT
PTVCSKYYIHPEVVNLFREDRLMNYLKRHDATKPKIEHLSGTEELVLKMLERVAKEKKAS
AA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcaaagaagaaggaaatacacgagctgtacgctgaccccagcagatctgccgcctgg
gcaggcctgcgttacacctctgatgaggggccgggctacacgcgcaaaaaagcaggaaaa
gggttttattaccttgataataaaggggagcgcgttacagatgagaaaacactggagcgt
ctaaacgctttagttatacccccagcctggacagctgtatggatctgcaagtctccgaaa
ggtcatctacaggcaaccgggcgcgataccaaaggcagaaaacaatacatataccacccg
cagtggcagcaggcccgcagccttaccaaatttggtcgcatgatagaatttggctattcc
cttcctaagctccgcgagcgtctgcagcaggatattgcttcccgtaacctggaccgccgc
aaggtgacagccctcgtgttaacacttctggacaatgccttgatccgaataggtaaccgc
agttatgcaaaatcgaataaatcgtacgggcttaccacgctgcgcgacaagcatgtaagg
attgatggcagtaacatcaagttctcttttgtaggaaaaaaaggagtagcgcaagaaata
gacctgaaggaccgccgcctagcccgcctcgtaaaaaaatgtaaagacataccaggatac
gacctgtttcagtattttgatgaaaacggggagcggcaaacacttgaatcaggtgatgtg
aatgagtatttgcgggaagctactgagcacgacttttcggcaaaggatttccgcacctgg
ggaggtaccgtacgcatggtggagtgcctggaaaacgtgctggaagcggagccggacctg
gacaaggaaaaggctataaaggcagccgttaaagaggtagcaaaaggcttgggtaataca
ccaactgtttgcagtaaatactatatacatccggaggtggtaaacttgttccgggaagac
aggctgatgaattacctgaaacgacatgatgccacaaaacccaaaatagagcacttatct
ggtacagaagaactagtgctaaaaatgctggaacgtgtggcaaaagagaaaaaggcgtca
gcagcctaa

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