Pontibacter korlensis: PKOR_16720
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Entry
PKOR_16720 CDS
T03841
Name
(GenBank) Fe-S cluster assembly protein HesB
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pko
Pontibacter korlensis
Pathway
pko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKOR_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_16720
Enzymes [BR:
pko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PKOR_16720
DNA repair and recombination proteins [BR:
pko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKOR_16720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Myb_DNA-binding_7
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AKD05780
UniProt:
A0A0E3ZKB2
LinkDB
All DBs
Position
complement(3896510..3897106)
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AA seq
198 aa
AA seq
DB search
MMSAFANDPIICEIIEQGQPLKSSRSEDLYLKLLSAIISQQLSTKVAAVIFRRFRELFPE
EYPHPQLVLEAPDDVLRGAGLSFQKIGYVRNVAAFAADGNLKHATIDAMEDEDLIRHLTQ
IKGVGRWTVEMLLMFALERPDVFPVDDLGIQNAMKRHYGLETSGKALRVQMQEIAEKWRP
YRTIASKYLWQSLDNIPG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagcctttgcaaacgatcccatcatttgtgagattatagagcaagggcagcca
ctgaagtcctcccgctccgaagatttatacttaaaactgctgagtgccattatatcgcag
caactaagcaccaaggtagcggcggtaattttcaggaggttcagagagcttttcccggag
gagtacccgcacccgcaactagtcctagaggcaccagatgatgttttaagaggtgctggc
ttatcgtttcagaagattggctacgtacgcaatgtagctgcttttgctgcagacggcaat
ttaaagcatgccactatcgatgcgatggaagacgaagacctgatcaggcaccttacccaa
ataaaaggtgtgggccgctggacagtagaaatgctgctgatgtttgccctggagcgccca
gacgtattcccggtggatgaccttggtatccaaaatgcgatgaagcggcactatggttta
gaaacaagcggcaaagctcttcgtgtgcaaatgcaggaaatagctgaaaagtggcgcccc
taccgcaccattgccagtaagtacctctggcaatctttagacaacatcccaggataa
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