Pontibacter korlensis: PKOR_17040
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Entry
PKOR_17040 CDS
T03841
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pko
Pontibacter korlensis
Pathway
pko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKOR_17040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_17040
Enzymes [BR:
pko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PKOR_17040
DNA repair and recombination proteins [BR:
pko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKOR_17040
Prokaryotic type
PKOR_17040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AKD04483
UniProt:
A0A0E3ZGZ1
LinkDB
All DBs
Position
3969467..3970129
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AA seq
220 aa
AA seq
DB search
MHVKIEESWQNILQDEFEKPYFKELVSFVRDEYATQKVYPSGNQIFNAFEMCPFDKVKVV
ILGQDPYHGPNQANGLAFSVSDKVRTPPSLLNIFKEIKSDLGKDIPATGNLERWATQGVL
LLNATLTVRAGNAGSHQRKGWEEFTDAVVQKVNELKENVVFMLWGAYAQKKGGFIDERKH
LVLKAAHPSPFAADRGFFGSRHFSKANTYLQQHGKEPVDW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaaagatagaagaaagctggcaaaatatcttacaagatgaatttgaaaaacca
tactttaaggaactggtttcttttgtaagagacgaatacgcgacacaaaaagtttatccg
tcaggcaaccagattttcaatgcttttgagatgtgccctttcgataaggtaaaggttgta
attctggggcaagacccataccatggaccgaaccaagccaacggcctggctttttcggta
agtgacaaggtgcgcacaccgccatctctccttaatatttttaaagagataaaaagcgac
cttggtaaggatatacctgccacaggaaacctggagcgatgggccactcaaggtgtactt
ctattaaatgccactctaacggttagggcaggcaatgcaggctctcaccagcgaaaaggt
tgggaggagtttacagatgcagtggtgcaaaaggtaaatgagctaaaggagaatgttgtg
ttcatgctctggggggcttatgctcaaaagaaaggaggctttattgatgagcgaaaacac
ctggtgctaaaggcggcccatccctcgccgtttgcagcggacagagggttcttcggtagc
cgccattttagtaaagcaaatacctacctgcagcagcatggcaaggaacctgtagactgg
tag
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integrated database retrieval system
