Pontibacter korlensis: PKOR_21615
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Entry
PKOR_21615 CDS
T03841
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pko
Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pko03016
]
PKOR_21615
Enzymes [BR:
pko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PKOR_21615
Transfer RNA biogenesis [BR:
pko03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PKOR_21615
Prokaryotic type
PKOR_21615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AKD05188
UniProt:
A0A0E3ZGX5
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All DBs
Position
5052321..5053238
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AA seq
305 aa
AA seq
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MDFELRILGSSSATPSANRHHTAQVLTIGNQYHLVDCGEGTQMQLMLYKIKHQRICNIYI
SHLHGDHYFGLAGLISTMHLQGRQTPLHLFGPPGLSEILSLQFKYSGTNLNFKLVFHELD
TTCYKKIFEDKGITVHTIPMEHRVPCCGFLFREKQKPRPLIKEKLPDFLRPPQLVRLKWG
EDIKDEAGNIILRNSDVTLEPKRSRSYAYCADSRYKPDLLPYLRQVDLLYHEATFTDDLR
ERADYTFHSTARQAAELAAAAQVRHLLIGHFSVRYKDLSPLLQEAQEVFTKTDLAIEGSI
FCVRE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcgaactcaggatattgggtagttcgtcggccacaccatcggcaaacagacac
cataccgcccaggttttaaccattggcaatcagtaccacctggttgattgcggtgaagga
acacaaatgcagctgatgctttacaagataaagcatcagcgcatttgtaatatctacatc
agtcacttacatggtgaccattactttggcttggcaggcttgatctccactatgcacctg
cagggccgccaaacacctctccatctttttggccctcccggcctctccgaaattcttagc
ctccagtttaagtactctggtaccaacctcaactttaagcttgtgtttcacgagctggat
acaacttgctacaaaaagatttttgaggataaaggcatcacggtgcataccatacccatg
gagcaccgtgttccttgctgtggctttttgttccgggaaaagcaaaagccccgccccctt
attaaagagaaactgccggactttttgcgccccccacagctggtgcgcctgaagtggggc
gaagacatcaaagacgaggctggcaacattattttacggaatagcgacgttacactggaa
cccaaacgcagccgcagctatgcttactgtgccgatagccggtataagccagacctgctg
ccctacctgcgccaagtagacctgctgtaccacgaggccacctttaccgacgaccttcgt
gaacgcgctgattatacctttcacagcactgcccgccaagctgctgaacttgcagccgcc
gctcaggtgcgccatttgctaatcgggcacttttcagtgcgctacaaagacttaagcccc
ctattgcaggaggctcaggaggtgtttacaaaaacagatctcgctatagaaggcagcatt
ttctgcgttagggagtaa
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