Pontibacter korlensis: PKOR_22310
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Entry
PKOR_22310 CDS
T03841
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pko
Pontibacter korlensis
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_22310
DNA repair and recombination proteins [BR:
pko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PKOR_22310
Archaeal homologous recombinant proteins
PKOR_22310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
PIN_8
Motif
Other DBs
NCBI-ProteinID:
AKD05296
UniProt:
A0A0E3UZG0
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Position
5205370..5206599
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AA seq
409 aa
AA seq
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MRVLHTSDWHLGQRLVNLERTEEHQHFLDWLLQTIEQEQVEVLLMSGDVFDNGSPSNTAL
KQYYNFLTKVCATCCRHIIITGGNHDAVSTLNAPKELLECFNIRIVGGASPNPLDELLEL
KNEQGEIELVVCAVPFLRDRDIRLSVPGESFEEREQRIKQGIAAHYEAFVPHIQAYKAEG
TPIVAMGHLFAAGGSASESEKEIHVGNLGQIGADQFPQEFNYVALGHLHRPQKVNNKHHI
RYSGSPIPLSFSEVTDTKVVFILDFEEGQLKELREVEIPCCRKLVRFKGSLEKVKQQIAV
YDNSSYKLTAWAELQVELQAPLPDLNQQLDEVLQSKKDELQLLIHRPPIIQKATQTLEQQ
VQEEVDLHSLREKDVFLKRCQSAFPDSDHSELLATFSELLELMGQEEES
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtactacacacatcagactggcatctgggccagcgccttgttaacctcgaacgc
accgaagaacaccagcacttcctggactggctgctgcaaaccatagagcaggagcaggtg
gaggttcttcttatgtccggcgatgtgtttgacaacggttctccttccaacacggcctta
aagcagtattacaacttcttaactaaagtatgcgccacctgctgtcgacatatcatcatt
acgggcggcaaccacgacgctgtttctactcttaatgcgcccaaagagctgttagagtgc
tttaacatccgtatagttggcggtgcctctcctaaccctctggatgagctgcttgagctt
aagaatgagcaaggagagattgagcttgtggtttgtgccgtacctttcctccgcgaccgg
gatatacgtttatctgtgccgggcgagagttttgaagagcgggagcagcgcataaagcaa
ggtatagctgcgcactacgaggcttttgtgccccatatacaagcatataaggctgaggga
acaccgatagtagccatggggcatttgtttgctgcaggcggctctgcctcagagagcgag
aaggaaatacatgtaggcaatctaggtcagataggggctgaccagtttccgcaggagttc
aactatgtagcccttgggcacctgcaccgcccgcaaaaagtaaacaacaaacatcatatc
cgctactctggttctcctataccactcagctttagtgaggtaacagataccaaagttgtt
tttatacttgattttgaagaaggacagctgaaagaacttcgggaagttgagattccatgt
tgccggaaattagtacgtttcaagggtagcctggagaaggtaaaacaacaaattgctgtt
tacgacaacagctcatacaagcttacagcctgggctgaattacaggttgaactccaagca
cccctccccgacctgaaccagcagctggacgaggtattgcaatcgaaaaaggatgaactg
caactccttatccaccggcctcctatcatacaaaaagccacgcaaacgcttgaacaacag
gtacaggaagaggttgatttgcatagtctgcgggagaaagacgtattcctgaagcgctgc
caaagtgctttcccggattctgaccattcagagcttttagctacattctcagagctgctg
gagctgatggggcaggaagaagaaagctaa
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