Paenibacillus konkukensis: SK3146_00394
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Entry
SK3146_00394 CDS
T09860
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK3146_00394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_00394
Enzymes [BR:
pkp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SK3146_00394
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SK3146_00394
BRITE hierarchy
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQZ81238
LinkDB
All DBs
Position
complement(477749..478330)
Genome browser
AA seq
193 aa
AA seq
DB search
MSDFMPVPLKEDPPPSHAVDCRRCELANQRQRVIWGEGTPGAPIFILLDNPGMREDAEGN
PFVCGTREALQQGMYEAGLAPEKVYVSFLLKCRPRRAYNKPLARETCFPYFQYQLSVSKA
SLLLGLGNTVVQTLFPHDESDVKSLRGRWHDFQGIPIAFSYHPLAVRRRPALQKYLAEDL
RFVVRKAKEMSLI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttatgccggtgccgctgaaggaagatccgccgccgtcacatgcggttgat
tgccggagatgcgagcttgccaatcaacgtcaacgagtgatttggggcgaagggacgccc
ggggcgcccatttttatcttgttagataacccgggaatgcgagaggatgccgaagggaat
ccgttcgtatgcggcacgcgcgaagcgctgcagcaagggatgtatgaagccggattggcg
cccgagaaggtctatgttagctttctcctgaaatgtcgtcctagacgggcttacaataaa
ccgcttgccagggagacttgtttcccttatttccagtatcagctctcggtaagcaaggcc
tctctgcttctgggcttggggaacacggttgtgcaaacgctatttcctcatgatgagagc
gacgtaaaaagcttgagaggaaggtggcatgactttcaagggattcccattgctttctcc
taccatccgttggcggtacgccgaagaccggcgcttcagaagtatttggcggaagacctg
cggttcgttgttcgcaaagccaaggaaatgagccttatataa
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