Paenibacillus konkukensis: SK3146_00438
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Entry
SK3146_00438 CDS
T09860
Symbol
lsrB_1
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SK3146_00438 (lsrB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkp02000
]
SK3146_00438 (lsrB_1)
Transporters [BR:
pkp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SK3146_00438 (lsrB_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
UQZ81282
UniProt:
A0ABY4RFS7
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All DBs
Position
complement(525224..526297)
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AA seq
357 aa
AA seq
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MVRRMSICLLLAVAVLTACSASGGKPQYEVIYTMDAPPPTAGTGSAEETPQPPDGEKKSY
TIGMVPKAMENPYFNVANDGAQEAAADLGVKVLFRGPQTADSDQQAKAIESLLASGVDLL
AVSANDPERLAPVLRQAKEKGVKVITWDSDTFPESRAFFVNMVDPETLGRHLMDTMAAHI
PDHGEFAVLTGSLSAASLNEFIQWIRTQQEQFYPNMKLVEVAPTDDLPQKAYEAASRLLK
DHPRLAGIIGNSAIATPAAAQAIKEAGQAGVVKVVGLSTPVLIGSYLKDGSAQMATLWSP
KRLGYLTVALAKQYLDGELPYNGEAVNNVGHIRVNGDKVIMGEPLDFTKQNAGQYDF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaggatgagcatctgtttgctgttggccgtcgctgtgctgaccgcctgctcg
gcaagcggagggaagccgcaatacgaggtgatctacaccatggatgcgccacctcctacg
gccggaaccgggtctgcggaggaaacgccgcagccgcctgatggcgagaagaagagctat
acgatcggcatggtgcccaaagcgatggaaaatccttacttcaacgtagccaacgacgga
gcgcaggaggcggcggccgatttgggcgtcaaagttctgtttcgcgggccgcagacggcc
gactccgaccagcaggcgaaagccatcgaaagtctgctcgcaagcggcgtcgatctgctg
gccgtatcggcgaacgacccggaacggctcgctcccgtattgagacaggcgaaggagaag
ggtgtgaaagttatcacatgggattcggacacgttcccggaatcgcgagcgttctttgtc
aacatggtcgatcccgagacgctgggcaggcatctgatggacacgatggccgcccatata
ccggatcacggcgaatttgcggtgttgaccgggtcgctctccgccgcaagtttgaacgaa
tttattcaatggattcgcacgcagcaggagcagttttatccgaatatgaagctggttgaa
gtcgcgccgaccgacgatctgccccagaaggcgtatgaagcggccagccggctgctgaag
gaccatccccgcctggctggcattatcggcaactccgcaatagcgacgccggcggcggcc
caagcgataaaagaagccggccaagcgggcgtcgtcaaggtcgtcgggttgtcgacgccg
gtgcttatcggctcgtatctgaaagacggctccgcgcaaatggcgacgctgtggagtccc
aaacggctaggctacttgaccgtcgctttggcgaagcagtatttggacggagagctgcct
tacaacggtgaagcggtgaacaatgtcggccatatcagggtgaacggagataaggtgatt
atgggagaaccgctcgattttacgaagcagaacgcaggtcaatatgatttctga
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