Paenibacillus konkukensis: SK3146_02193
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Entry
SK3146_02193 CDS
T09860
Symbol
mutM_2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK3146_02193 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_02193 (mutM_2)
Enzymes [BR:
pkp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SK3146_02193 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SK3146_02193 (mutM_2)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SK3146_02193 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Zn_ribbon_RRN7
NFACT_N
Zn_Ribbon_TF
HVO_2718
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UQZ83032
LinkDB
All DBs
Position
complement(2553896..2554747)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVKRTLSQLVVGKTIGNVTVHLRRIIQRPEEPLEFSMMLQGETIRSVERRGK
FLRFLMDNYTMVSHLRMEGRYGVYDSKDPLETHTHVVFHFTDGSELRYKDVRQFGTMHLF
PLGQELEEQPLKKLGLEPLDDAFTLDAFKSKLAGRSTKIKPLLLNQEYIVGLGNIYVDES
LFLAGIHPEREAGSLSRQELASLYEAILSTLNDAVAAGGSSVKSYVNGQGEIGLFQHQLK
VYGHKGEPCPVCGAHIEKSVVAGRGTHVCPNCQPLKKQRSRKA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaggtcgaaacagtcaaacgaacattaagtcagctggtcgtcggg
aagacgatagggaatgtcacggtgcatttgcgcagaattattcagcggccggaagaaccg
ctggagttcagcatgatgctgcagggcgaaacgatacgctccgtcgagcggcggggcaaa
tttctccgctttctgatggacaactatacaatggtttcgcatttgcgcatggaagggcgg
tacggcgtctacgacagcaaagatccgctggagacgcatacgcacgtggtgtttcatttt
accgacggcagcgaattgagatataaggacgtgcgccaattcgggacgatgcatttgttc
ccgttaggtcaggagctggaggaacagccgctgaagaagctgggtttggagcctctggac
gatgcgttcacgctcgatgcgttcaagagcaagctggcggggcgctcgaccaagatcaag
ccgctcctgctgaatcaggaatatatcgtagggctcgggaatatttatgtggatgagtcc
ctatttcttgccgggattcaccccgagcgggaagcgggctccttgtcgcggcaggagctg
gcttccttatacgaggcgatactcagcacgttgaacgatgcggttgccgccgggggctcg
tcggtcaagtcatatgtaaacggacaaggcgagatcggcttgttccagcatcagctcaaa
gtgtacgggcataaaggcgagccttgcccggtttgcggggcgcacattgagaagtcggtg
gtggcaggacgggggacgcatgtttgcccgaactgtcagcccttgaagaagcaacgaagc
cgcaaggcgtaa
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