KEGG   Paenibacillus konkukensis: SK3146_02194
Entry
SK3146_02194      CDS       T09860                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pkp  Paenibacillus konkukensis
Pathway
pkp03030  DNA replication
pkp03410  Base excision repair
pkp03420  Nucleotide excision repair
pkp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SK3146_02194 (polA)
   03410 Base excision repair
    SK3146_02194 (polA)
   03420 Nucleotide excision repair
    SK3146_02194 (polA)
   03440 Homologous recombination
    SK3146_02194 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkp03032]
    SK3146_02194 (polA)
   03400 DNA repair and recombination proteins [BR:pkp03400]
    SK3146_02194 (polA)
Enzymes [BR:pkp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SK3146_02194 (polA)
DNA replication proteins [BR:pkp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SK3146_02194 (polA)
DNA repair and recombination proteins [BR:pkp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SK3146_02194 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SK3146_02194 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 Mt_ATP_synt
Other DBs
NCBI-ProteinID: UQZ83033
LinkDB
Position
complement(2554766..2557426)
AA seq 886 aa
MSKLILIDGNSLANRAFYALPPLSNSSGLHTNAVYGFTTMLLKLLEEQQPTHFLVAFDAG
KVTFRHKDYAEYKGGRAKTPPELSEQFPLLRDLIRAFGMAQFELEGYEADDIIGTLTRIA
DEKGDIEVIVVTGDKDMLQLVSDRVKIALTRKGITEVELYDKALIEEKYGLKPHQIIDLK
GLMGDASDNIPGIPGVGEKTALKLLHEYESVEGVLENAAQLKGKMKEKVEQHADEARMSK
ELATIYREVPLTTQWEELAYSGYEGQALAGMFRKLEFKSLLEKMDFSGGDSAEAGREQAS
IEAAVVGEDDMAELVGILPQVTALHVEAAGDNPHNAEMIGLALYTEAKCYYVPFERLQEG
TAEAEAVKAWLQSSDKALAVYDQHRAEILLAWRGIHLRGTEFDVHLAAYLLDPTESALTL
NGLTVKYGLPALKADEDVFGKGAKFQIPALDVLCDYLCRKAAAIHQLTEPMKRDLEESGM
HQLFYGLEQPLASVLAAMEEKGIEVDTEALKQYGEELGSQLETIMHSIYDAAGMEFNINS
PKQLGEVLFEKLQLPTVKKTKTGYSTDAEVLEKLEPYHPVIGHILHFRTLSKLQSTYVEG
LLKEVRKDTGKVHTYYRQTIAATGRLSSQYPNLQNIPIRLEEGRKIRRVFVPSKPGWSIL
TADYSQIELRVLAHISQDEKLMEAFLHDLDIHTKTAMDVFGVSESQVDSNMRRQAKAVNF
GIVYGISDYGLSQNLNITRKEAAQFIEQYFAVFQGVRQYMDDIVRKARQDGYVTTLLQRR
RYLPEITASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDERLKRDGLRSRMLLQVHD
ELVFEVPEDEIETMKTAVAEVMENALKLDVPLKVEVDTGSNWYEAK
NT seq 2661 nt   +upstreamnt  +downstreamnt
gtgtcgaaattgatattgattgacggcaacagtcttgccaatcgggcgttctatgcattg
ccgccgctcagcaactccagcggactgcatacgaatgcggtgtacggatttacgacgatg
ctgctcaagctgctggaagagcagcagccgacccatttcctcgtggcgttcgatgcgggg
aaggtgacgtttcgacataaagactatgcagaatataaaggcggaagggcgaagacgccg
cccgagctgtccgagcagtttccgctgcttcgcgatttgatccgcgccttcggtatggcg
cagttcgagctggaagggtacgaagccgacgatattatcggtacgctgacccgcattgcc
gacgagaaaggcgatatcgaggtgatcgtcgtcaccggagacaaagatatgcttcagctt
gtctcggatcgcgtgaagatcgcgctgacgcgcaagggcattaccgaggttgagctgtac
gataaggcgctgattgaggaaaagtacggtcttaagccgcatcaaattatcgatttgaaa
gggctgatgggcgacgcctcggataatatcccgggcattcccggcgttggtgagaagacg
gcgctgaagctgctgcacgagtatgagtccgtcgaaggcgtccttgagaacgccgctcag
ctcaaaggcaagatgaaggagaaagtcgagcagcatgcggacgaggcccgaatgagcaag
gagctggcgacgatctaccgtgaagtgccgctgacgacgcagtgggaggagctggcttac
tccggttacgaaggacaggctctggcgggcatgttccgcaagctggagttcaaatcgctg
cttgagaagatggatttctccggcggagattcggctgaagccgggcgggagcaggcttct
atcgaagcggcggttgtcggcgaagacgacatggccgagctggtcggcatcctgcctcag
gtgacggcgctgcatgtggaagcggccggagataatccgcataacgcggagatgatcggt
ttggcgctgtatacggaggccaaatgctattatgtgccgttcgagcggctgcaggaaggc
actgcagaagcggaagccgtgaaggcgtggctccagtcctcggacaaagcgctggccgtc
tacgatcagcatcgcgccgagatcttgctggcatggcgcggcattcatctgcgcggaacg
gagttcgacgtgcatcttgccgcttatttgctcgatcctacggagtcggcgcttacgctt
aacggtcttaccgtcaagtacggactgccggcgcttaaagcggatgaggatgtattcggc
aagggagccaaattccaaattcccgcgttggacgttctatgcgactatttatgccgcaag
gcggcggcgattcatcagctgacggagccgatgaaacgggatctggaagaaagcggcatg
catcagctgttttacgggctcgagcagccgctggcaagcgttcttgccgcgatggaggag
aagggcatcgaggtcgatacggaagcgctcaagcagtacggcgaagagctgggctcgcag
ctggagacgattatgcattcgatctatgacgccgcagggatggagttcaatattaactcg
cctaagcagctcggcgaagtgttgttcgagaagctgcagcttcctaccgtaaagaagacc
aagaccggttattctaccgatgcggaagtgcttgaaaagctggagccgtatcatccggtc
attggccatattctgcatttccgcacgctgtccaagctgcaatctacttatgtggaaggg
ctgctcaaggaggtgcgcaaagataccggcaaggtgcatacctattaccggcagacgatc
gcggcgaccgggcggctcagcagccaatatccgaatctgcagaacattccgatccgtctg
gaggaaggccgcaaaatccgcagagtcttcgttccctcaaagccgggctggtcgatcttg
actgcggattactcgcagatcgagctgagggtgcttgcgcatatatcccaggatgagaag
ctgatggaggcgttcctccacgacctggatatccatacgaagacggcgatggatgtgttc
ggcgtctccgagtcgcaagtggactccaatatgagaaggcaggcgaaggccgtcaatttc
ggtatcgtctacggtatcagcgattacggtctgtcgcagaacttaaatattacccgtaaa
gaagcggcgcagtttatcgagcaatattttgccgtgttccagggcgttcgccaatatatg
gacgatatcgtccgaaaagcgcgccaggacggctatgtcacgacgctactgcagcgccgc
cgctatttgcctgagattaccgcatccaatttcaatctgcgctccttcgccgaacgtacg
gcgatgaatacgccgattcagggcaccgcggcggatattatcaagctggcgatggtgcag
atggacgaacgattgaagcgcgacggcttgcgcagccggatgctgcttcaggtgcatgac
gaattggtgttcgaagtgcccgaagacgaaatcgaaacgatgaaaacggcggtggcggaa
gtgatggagaatgcgctgaagctggatgtgccgctgaaagtggaagtcgataccggctcc
aactggtacgaagccaagtaa

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