Paenibacillus konkukensis: SK3146_02302
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Entry
SK3146_02302 CDS
T09860
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03030
DNA replication
pkp03430
Mismatch repair
pkp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SK3146_02302 (dnaE)
03430 Mismatch repair
SK3146_02302 (dnaE)
03440 Homologous recombination
SK3146_02302 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkp03032
]
SK3146_02302 (dnaE)
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_02302 (dnaE)
Enzymes [BR:
pkp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SK3146_02302 (dnaE)
DNA replication proteins [BR:
pkp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SK3146_02302 (dnaE)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SK3146_02302 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UQZ83141
LinkDB
All DBs
Position
complement(2698098..2701913)
Genome browser
AA seq
1271 aa
AA seq
DB search
MSDFVHLHVHSEYSLLDGAARIDDLVGQAAGLGMQALALTDHGVMYGAIPFYKACKKHGI
KPIIGCEVYYTAGSIRDKGTRQEQPIYHLILLAKNETGYRNLMQLCSIGHLQGYHYKPRI
DPQLLARHSEGLICTSSCLGSEVSQHLLHGRYDEAKQAAARYRDIFGEDFFLELQDHGLM
EQKKVMQSMLRLSEDTGVPLIVTNDVHYVREPDAQVQDILLCIGTGKTVDDPERLKFPST
QLYLKSADEMKRLFAHVPQAIENTRIVAERCNLELEFGRSILPQFEPIPEERTAGEYLAE
LCRQGLEIRYGHLAEWQDPAHREKVEERLVYELSVIERMGYSDYFLIVWDFIRFAHEKGI
VTGPGRGSSAGSLVAYVLRITNVDPIRYRLLFERFLNPERISMPDIDIDFSDVRRDEVID
YVVGKYGRDRVAQIITFGTMAAKAAVRDVGRVLNMPYNEVDRAAKMIPHQLGMTLAEAIE
ANPELKALAAKQPKTAELLRLAMKVEGMPRHASTHAAGVVISREPLTQYVPLQEGNEQTA
LTQYSMEHLESIGLLKMDFLGLRTLSIIERTLQWVKEQTGDDIDFQQLPMDDPATYELLC
RGDTTGVFQLESPGCRRVLKELRPTQFEDIISVVALYRPGPMEFIPRFIQGKHGLHEVEY
PHPVLEPILKDTYGIIVYQEQIMQIASVMAGFRLGEADLLRRAVSKKKREVLDEERAHFV
KGSLSQGFTEAEANKVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGSHNKVAEYVDECRRMGIPVLPPDVNESGVVFTPVMPGGAGGQGPGDAGQDSAGPEG
SEAAVEGAARPASGAIRFGLAAVKNVGTHAIESIMSERAKEAGAYTSLIDLCRRVDLRVC
NKRVLESLIQGGATGSLPGHRAQQLAMLEETIEAAVKWRKERDDLQLHLFGFVEEVNWEV
EYPDIRPFTMTQQLELERELLGLYISGSPLDDYETVLRDIEIDPLHYLPEMPDHSEVIVA
GMVLSSKTIVTKKGQPMAFMELEDRVAKVEVVLFPEAWKHCAPLVQKGKPLLVKAKLQQG
DEDVKLLADQVFALSDPELRSKAARRAPAGGATGRGQQPGAPAAGARTAGSQASRTAGSQ
PAVTRAASAQPQSSAQGAGGRTAGPPPAAARADTAPQQRREQAAAGGQSQAARPARSQRV
YVKISADHEQPQVLARLKRMLLEHEGALPVILYYEKSQKTLGLSEQFNVKPSPKLFQEME
ELLGKDTVKVK
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttcgtccatctgcatgtacacagcgaatacagcctgctggatggcgcggcg
cgcatcgacgatctggtcggacaagcggccggcctcggcatgcaggcactggccttaacg
gatcatggcgtgatgtacggcgccattcctttctataaagcgtgcaagaagcacggcatc
aagccgatcatcggctgcgaggtgtattacacggcaggctctatccgcgataagggaacg
cggcaggagcagccgatctatcatttgattttgctggcgaagaacgagaccggctaccgc
aacctgatgcagctgtgttcgatcgggcatttgcaaggataccattacaagccgagaatc
gatccgcagcttctcgcccgccattccgaagggctgatctgtacgagctcctgccttggc
agcgaggtgtcgcagcatctgctgcacggcagatacgacgaagcgaagcaggcggccgcc
cggtaccgggatattttcggggaggacttcttcctggaattgcaggatcacgggctgatg
gagcaaaagaaagtgatgcagagcatgctccgtctgagcgaggatacgggcgttccgctt
atcgtcaccaacgacgtgcactacgtccgcgagccggacgcccaggtgcaggatattttg
ctgtgcatcggaacgggcaagacggtcgacgatccggagaggctgaaattcccgtctacg
cagctttacttaaaaagcgccgacgagatgaagcgtctgttcgcgcatgtgccgcaggca
atcgaaaatacgcggatcgtggcggaacggtgcaatctggagctcgaattcggccgctcg
attctgccgcagttcgagccgattcccgaagaacggacggcgggagaatatcttgccgaa
ttgtgccgccaagggctggagatccgctacgggcatctagccgagtggcaggaccccgcg
cacagggagaaggtcgaggagcgtcttgtctacgagctgtccgtcatcgagcggatgggc
tactccgactatttcctgatcgtctgggatttcatccggttcgcccatgagaagggcatc
gtcacagggcccgggcgggggtcttcggccggcagtctcgtagcctacgtgctgcgcatt
acgaacgtcgatccgatccgctaccgtctgctgttcgagaggtttctcaatccggaacgg
atttcgatgccggatatcgatatcgatttcagcgacgtgaggcgcgacgaggtcatcgat
tatgtggtaggcaaatacggccgcgaccgcgtcgcccagatcatcaccttcgggacgatg
gcggccaaggcggcggtgcgcgacgtcggacgggtgctgaacatgccgtacaacgaagtg
gaccgcgcggccaagatgatccctcatcagctcgggatgacgctagccgaagcgatcgag
gcgaacccggagctgaaggcgctggcggcgaagcagccgaagaccgcggagctgctgcgg
ctggcgatgaaggtcgaaggcatgccgcgccacgcctcgacccatgccgcgggcgtagtg
atctcccgcgagccgctgacgcagtacgtgccgctgcaggagggcaacgagcagaccgcg
ctcacgcagtattcgatggagcatctggagtcgatcggactgctgaagatggacttcctc
ggcctgcgcaccttatcgatcatcgagcggacgctgcagtgggtcaaggagcagaccgga
gacgatatcgactttcagcagctgccgatggatgatccggcgacgtacgagctgctctgc
cgcggcgatacgacgggggtattccagcttgagtctcccggctgcagaagagtgctgaag
gagctgcggccgacgcagttcgaggatatcatctcggtcgtggccttgtaccgtccgggg
ccgatggagtttattccccgctttattcaaggcaagcacgggctgcacgaggtggaatat
ccgcatccggtgctggagccgatcttgaaggatacgtacggcattatcgtctatcaggag
caaattatgcagatcgcgtccgtcatggccggcttccggctcggcgaagcggatttgctg
cggcgcgcggtcagcaagaagaagcgcgaggtgctggacgaggagcgggcccatttcgtc
aagggcagcttgtcgcagggcttcacggaagccgaggcgaacaaggtgtacgatatgatc
gtccgcttcgccgattacggcttcccgcgcgcccatgcgacggcgtacggcgtgctggcc
ttccagacggcgtatttgaaggcgcattatccggtgcagtttatggcgtcgatgctgacc
gccgtcatgggcagccataacaaggtggcggagtacgtcgacgaatgccgccgcatgggc
atccctgtgctgccgcccgatgtgaacgagagcggcgtcgtgttcacgccggtcatgccc
ggcggtgcaggcggtcaaggaccgggggacgccgggcaggattccgccgggccggaaggc
tcggaagcggcggtcgagggcgcggcaaggccggcgtcgggagcgatccgcttcggcctt
gccgcggtgaagaacgtcggcacgcacgcgatcgaatcgatcatgagcgagcgcgccaag
gaagcgggcgcttacacgagcctgatcgacttgtgcaggagagtcgatctcagggtgtgc
aacaagcgggtgctggagtcgctcatccagggcggagcgacgggctcgctgccggggcac
cgcgcgcagcagctggcgatgctggaggaaacgatcgaagccgccgtcaagtggcgcaag
gagcgcgacgatctgcagcttcacttgttcggcttcgtcgaggaagtgaactgggaggtc
gaatatcccgacattcgcccgttcaccatgacccagcagctggagctggagcgcgagctg
ctcggcctgtacatctccggcagcccgctcgacgattacgagacggtgctgcgcgacatc
gagatcgacccgctgcattatcttccggagatgccggatcacagcgaggtgatcgtggcc
ggaatggtgctgtcgagcaagacgatcgtcaccaagaaaggccagccgatggccttcatg
gagctggaagaccgggtagcgaaggtcgaggtcgtgctgtttccggaagcgtggaagcac
tgcgcgccgctcgtgcagaagggcaagccgctgcttgtcaaggcgaagctgcagcaggga
gacgaggacgtcaagctgctggcggaccaggtgttcgcgctgagcgatcccgagctgcgc
agcaaggcggctcgccgcgcgcccgcaggcggcgccaccggccgcgggcagcagccgggc
gcgcctgccgcaggagcgcgcacggccggctcgcaggcatcgcgcacggctggctcgcag
ccagcggtcacccgcgccgcaagcgcgcagccgcagtcttccgcccaaggcgcgggcgga
agaacggcggggccgccgcccgcagctgcccgggcggacacggctccgcagcagcgccgc
gaacaggccgctgcgggcgggcagagccaagctgcacggcctgcgcgctcccagcgggta
tacgtcaaaatatccgccgatcacgagcagcctcaggtgctggcccgattgaagcggatg
ctgctggagcacgaaggggcgctgcccgtcattctgtactacgagaaaagccagaagacg
ctcggcctgagcgagcaattcaacgtgaaaccgtctccgaagctgtttcaggagatggaa
gaactgcttggcaaagacacggtaaaagtgaaataa
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