Paenibacillus konkukensis: SK3146_02813
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Entry
SK3146_02813 CDS
T09860
Symbol
ccpN
Name
(GenBank) Transcriptional repressor CcpN
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkp03000
]
SK3146_02813 (ccpN)
Transcription factors [BR:
pkp03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SK3146_02813 (ccpN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
MarR_2
HTH_PafC
HTH_24
HrcA_DNA-bdg
HTH_IclR
Sigma70_r4
HTH_5
HTH_Crp_2
MarR
LexA_DNA_bind
HTH_AsnC-type
HTH_Mga
GntR
HTH_23
FaeA
HTH_28
TnsE_C
HTH_17
HTH_8
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
UQZ83626
LinkDB
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Position
complement(3286962..3287831)
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AA seq
289 aa
AA seq
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MCNIFYKNRSLSRQKYEYNAFKSRMRSIERPNFRLEGTVYLKAASYYGFKLAAIFDTMQI
IVNVRYDTDREVMDIELTARQLQIVEFVKQHAPITGEQIAEMLGLSRPTLRSDLALLVML
GYIDAKPKVGYSPGSAMSTGSQASRRLQGLKVKDVQSMPVIVRENASVHDAVVTLFMENV
GSLMVVDEESCLSGVISRKDLLKFTLGNTAAASMPVSMVMTREPNVIHVQPEDTVIDAAR
KMIHHQVDSLPVVVRSKHNTANGRPRWDIVGRVTKTIMTQILLELATEP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatatattttataaaaacaggtcactatcgcgtcaaaagtatgaatataacgcc
tttaaaagtaggatgcggtcaattgaaaggccgaatttccgtttagaagggacggtctat
ttgaaggcggcaagctattatggattcaagttagccgcaatatttgatacaatgcagata
atcgttaatgttcgatacgatacggacagggaggttatggacatcgaactgactgccaga
caactacaaattgtggaatttgtcaaacaacatgccccgattacaggggaacagatcgca
gaaatgctcggcttaagccgtccgacgcttcgttcggatttggctcttctcgtgatgctt
ggatacattgacgccaagcccaaagtagggtattcccccggatcggcgatgtcgaccgga
agtcaggcttcccgccgattgcaggggcttaaagtgaaagatgtgcagtcgatgccggtc
attgtgcgggagaacgcttcggtgcacgatgcggtagtaacgctttttatggaaaatgta
ggaagtctgatggtggtggatgaagaaagctgcttatccggcgtcatttcccgtaaggat
ttgctgaaatttacgctgggcaatacggcggcggcttcgatgccggtcagcatggtcatg
accagggagcccaatgtcattcatgtgcagccggaggatacggtcatcgatgcggcgcgc
aaaatgatacatcatcaggtcgacagtctaccggttgtcgttcgctccaagcataatacc
gcgaacggaaggccgcgctgggatattgtaggccgggtgacgaagacgatcatgacgcag
attttattggagctggcaacggagccgtaa
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