Paenibacillus konkukensis: SK3146_03137
Help
Entry
SK3146_03137 CDS
T09860
Symbol
nfo_2
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK3146_03137 (nfo_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_03137 (nfo_2)
Enzymes [BR:
pkp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SK3146_03137 (nfo_2)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SK3146_03137 (nfo_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
UPF0738
Motif
Other DBs
NCBI-ProteinID:
UQZ83930
LinkDB
All DBs
Position
complement(3660436..3661560)
Genome browser
AA seq
374 aa
AA seq
DB search
MVKIGSHVSFSDKGLLNAAEEAVSYGSSTFMIYTGAPQNTRRKPIESQFIEEGRALMEQH
GIGEIIVHAPYIINLGSYKDDTYELAVRFLQEEIRRTDYLGVKQIVLHPGAYTEKDAEYG
LARISQGLNEVLSGVKDTNVNIALETMAGKGTEMGRSFEELAAIIDKVEDNGRLSVCFDT
CHVHDAGYDIINDLDGVLEHFDNIVGLDRIAVVHLNDSKNPKGASKDRHAPVGAGWIGFE
AMNNVVHHEKLAHLPLILETPWIGKEDKLQRPMYEAEIALLSGTVEQRFGSNFMEDVERL
AHFFGKQDVNHRDYVLQTWEMLKSDAKKRKEDGREPMERLYDMVAEHRVFTELSEEQINH
RLTAWLAGQKVFQL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaatcggttctcacgtatcgttttcggataaagggctgttgaacgctgcggaa
gaagcagtatcttacgggtcttctacatttatgatatacacgggggcgccgcaaaatacg
cgccgcaagccgatagaatcgcaattcatcgaggaaggcagagcgttgatggagcagcac
ggcattggcgaaatcatcgttcatgctccgtacattataaatctcggttcctataaagac
gacacgtatgagttagccgtccgctttttgcaagaagagattcgccgcaccgactatttg
ggcgtgaagcagatcgtgcttcatccgggcgcttatacggaaaaggacgccgagtatggc
ttggcaagaatttcccaaggacttaacgaagtattgtccggcgtgaaggacacgaacgtg
aatatcgctttggagacgatggcgggcaaaggcacggagatgggacgcagcttcgaagag
ctggcggcgattatcgataaggtggaggataacgggcgtttatccgtctgcttcgatacc
tgtcacgttcatgacgccgggtatgatattatcaatgatctggacggcgtgctggagcat
ttcgataacatcgtcggcttggaccggatcgccgtcgttcacttgaacgacagcaaaaat
ccgaagggagcgagcaaagaccgccatgccccggtaggcgcaggatggatcggcttcgaa
gcgatgaataatgtcgtgcatcacgagaagctggcgcatcttccgctcatattggaaact
ccatggatcggcaaggaggacaagctgcagcgtccgatgtacgaggcggagatcgccctg
ctcagcggaacggtagagcagcgattcggctccaacttcatggaggacgtcgagcgactg
gcgcatttcttcggcaagcaggacgtcaaccaccgcgattatgtgctgcaaacgtgggag
atgctgaagagcgatgccaagaagcgcaaagaagacggccgcgagccgatggaacggctg
tacgatatggtcgcggagcaccgggtattcacggagctgtccgaagagcaaattaaccac
cgtttgacggcctggctggcaggccaaaaagtgttccaactgtag
DBGET
integrated database retrieval system
