Paenibacillus konkukensis: SK3146_03180
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Entry
SK3146_03180 CDS
T09860
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SK3146_03180 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkp03019
]
SK3146_03180 (groL_1)
03110 Chaperones and folding catalysts [BR:
pkp03110
]
SK3146_03180 (groL_1)
03029 Mitochondrial biogenesis [BR:
pkp03029
]
SK3146_03180 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkp04147
]
SK3146_03180 (groL_1)
Enzymes [BR:
pkp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SK3146_03180 (groL_1)
Messenger RNA biogenesis [BR:
pkp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SK3146_03180 (groL_1)
Chaperones and folding catalysts [BR:
pkp03110
]
Heat shock proteins
HSP60 / Chaperonin
SK3146_03180 (groL_1)
Mitochondrial biogenesis [BR:
pkp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SK3146_03180 (groL_1)
Exosome [BR:
pkp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SK3146_03180 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
SK3146_03180 (groL_1)
Exosomal proteins of breast cancer cells
SK3146_03180 (groL_1)
Exosomal proteins of colorectal cancer cells
SK3146_03180 (groL_1)
Exosomal proteins of bladder cancer cells
SK3146_03180 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
UQZ83968
UniProt:
A0ABY4RR29
LinkDB
All DBs
Position
complement(3713956..3715584)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID
KAVKAAVEELKNISKAIEGKQSIAQVAAISAADEEVGELIAEAMEKVGKDGVITVEESKG
FATELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISNIQEILPVLEKIVQ
QGKPLLLIAEDVEGEALATLIMNRLRGTFTCVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EDLGLDLKSTRPDQLGTARQVRVTKENTIIVDGAGDKKDIGARISQIRAQLEETTSDFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALVNV
YSAVAAVQSSGDEQTGVNIVLRALEEPVRTISANAGQEGSVIVERLKKEAVGIGYNAATG
EWVNMFESGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEKDKPAMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattcagtgaagacgctcgccgcgcaatgcttcgtggtgttgac
gcgctggcaaatgccgttaaagtcactttgggtccaaaaggccgcaacgtcgttttggag
aaaaagttcggcagcccgctgatcactaacgacggcgtgaccattgccaaagaaatcgaa
ttggaagacgcgttcgagaacatgggcgctcagctcgttaaagaagtagcgaccaaaacg
aacgatgttgccggcgacggtacaacaactgcaaccgttctggctcaagcgatgatccgc
gaaggcttgaaaaacgtaacggcaggcgctaaccctatggtaatccgcaaagggatcgac
aaagcggttaaagcggctgtagaagaattgaaaaacatctccaaagcaatcgaaggcaaa
caatccatcgcgcaagttgcggctatctccgctgctgacgaagaagtaggcgaactgatc
gccgaagctatggaaaaagtgggcaaagacggcgttatcaccgttgaagagtccaaaggc
ttcgctacggagctggaagtggttgaaggtatgcaattcgaccgcggctacatctctcct
tacatgatcaccgatacggataaaatggaagctgtattggaaaacccatacatcttgatc
acagacaaaaaaatctccaacatccaagagatcctgcctgtgcttgagaaaatcgtacaa
caaggcaaaccgcttctgcttatcgccgaagacgtagagggcgaagcattggctaccttg
atcatgaacagactgcgcggcacgttcacttgcgtagcggtaaaagctcctggcttcggc
gaccgccgcaaagccatgctgcaagatatcgctgccttgactggcggacaagtaatcacg
gaagatcttggcttggatctgaaatccactcgtccggaccaactgggtacggctcgtcaa
gttcgcgtaacgaaagaaaacacgattatcgtggacggcgctggcgacaaaaaagacatc
ggcgctcgcatttcccaaatccgcgctcaactggaagaaacgacttccgacttcgacaaa
gagaagctgcaagagcgtctggctaaattggccggcggcgtagcggtaatcaaagtcggc
gcagccaccgaaaccgagttgaaagagcgcaagcttcgcatcgaagacgctctgaacgct
actcgcgctgcagtagaagaaggcatcgtatccggcggtggtacggctctggttaacgta
tacagcgcggttgcagctgtacaatcgtccggcgacgagcaaaccggcgtaaacatcgtc
ctgcgcgctctggaagagcctgtacgcacgatctcagctaacgctggccaagaaggctcc
gttatcgttgagcgtctgaagaaagaagcagtaggcatcggctacaacgcagctaccggc
gaatgggtgaatatgttcgaatccggtatcgttgaccctgctaaagtaactcgttccgct
ctgcaaaacgcagcttccgttgcggctatgttcttgactaccgaagcggttatcgccgac
aaaccggagaaagacaaaccagctatgcctgatatgggcggcatgggcggtatgggtgga
atgatgtaa
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