Paenibacillus konkukensis: SK3146_03356
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Entry
SK3146_03356 CDS
T09860
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SK3146_03356 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkp03019
]
SK3146_03356 (recQ)
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_03356 (recQ)
Enzymes [BR:
pkp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SK3146_03356 (recQ)
Messenger RNA biogenesis [BR:
pkp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SK3146_03356 (recQ)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK3146_03356 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF7563
Motif
Other DBs
NCBI-ProteinID:
UQZ84123
LinkDB
All DBs
Position
complement(3896513..3898291)
Genome browser
AA seq
592 aa
AA seq
DB search
MAGMMERAERVLKSYYGYATFRDGQKKVIRSVLDKKDTLGIMPTGGGKSICYQVPAMLMQ
GTTIVISPLISLMKDQVDGLDSIGIPATYINSSLTYAQVELRIRKAARGEYKLLYVAPER
LESERFIDLMSEVEVPMVAVDEAHCVSQWGHDFRPSYLAISRLVERLPQRPIVTAFTATA
TDQVREDIVKHLQLQEPEMHVTGFARENLAFSVIKGENKRDVMLDYIREHSEEVGIVYAA
TRKEVDNLYELLRKNKVPVGKYHAGLSDKERAEAQEQFLYDEVRVIVASNAFGMGIDKSN
VRYVIHYNMPKNMEAYYQEAGRAGRDGEPSECMLLFSPQDIHIQKFLIEQSIADPARQAQ
EYRRVQQMADYCHTSQCLQRYIVRYFGDDCEDCGRCSSCSTERQLTDITVESQKIFSCVR
RMRERFGATTVAAVLKGSRSKKVIELGFHELTTYGLLKDRTEKEIVDLIQLLVAEGYLII
TEGKYPVLRLAPKAQSVLSGEERVVQKMRIRTEPVVRDVESELFDQLRGLRLEIARREGI
PPYIIFPDSTLREMCGVKPTNPAAMLKIKGVGEAKFFKYGAYFIEFFKNLNG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggcatgatggagcgggccgaaagagtgctcaaatcatattacggctacgcgacg
tttcgggacggacagaagaaagtgattcgaagcgttctcgataaaaaggatacgctcggc
attatgccgacaggcggcggcaaatcgatttgttatcaggtgccggccatgctaatgcag
gggacgaccattgtcatttcgccgctgatttctctcatgaaggatcaggtggacgggctg
gacagcatcggcattcccgccacctatattaacagctcattgacctacgcgcaggtggag
ctcagaatccgcaaggcggcccgcggcgagtacaagctgctctatgtggcgccggagcgg
ctcgaatcggagcggttcatcgatctgatgagcgaggtcgaggtgccgatggtagcggtg
gacgaggcccactgcgtatcgcagtgggggcatgacttccgccccagctacctggcgatc
agccggctcgtcgagcgtctgccgcagcggccgatcgtaactgccttcacggcaacggcg
acggatcaagtacgcgaagatattgtcaagcatctgcagctgcaggagccggagatgcat
gtgaccggcttcgcgcgcgagaatctcgccttctccgttatcaaaggagagaataagcgc
gatgtgatgctcgattatatccgcgagcactcggaggaagtcggcatcgtgtacgcggcg
acgcgcaaggaagtggacaacctgtatgagctgctgcgcaaaaataaggtgcctgtgggc
aagtatcatgcgggcttaagtgataaagagcgggccgaggcgcaggagcagtttctgtac
gacgaggtgcgagtgatcgtagcgagcaacgccttcggcatggggatcgataaatcgaac
gtccgctatgtcattcattataatatgccgaaaaacatggaagcttattatcaggaagcg
ggccgggcgggccgtgacggagagcccagcgagtgcatgctgctgttcagcccgcaggac
attcatatccagaagtttctgatcgagcagtcgatcgccgatcctgcgcggcaagcacag
gaataccgcagggtgcagcagatggcggattattgccatacgtcgcaatgtctgcagcgc
tatatcgtccgctatttcggcgacgattgcgaggattgcggccgctgcagcagctgcagc
accgaacggcagctgacggatattaccgtcgagtcgcaaaaaattttctcctgcgtgcgc
cgaatgagagagcgcttcggggcgacgaccgttgccgcggtgctcaaaggctcgcgcagc
aaaaaggtgatcgagctgggcttccatgagctaactacctatgggctgctcaaggaccgg
acggagaaggagatcgtcgatctcatccaattgctcgtagccgaaggatacttgatcatc
accgaggggaaatacccggtgctgcggcttgcgccgaaagcccagtcggtactgtccggg
gaagagcgggtcgtgcagaaaatgcgcattcgtaccgagccggtcgtccgtgacgtcgaa
tccgagctgttcgaccagctgcgcggcttgcggctggagattgcgcgtcgcgaagggatt
ccgccgtacatcatctttccggacagcacccttagggagatgtgcggcgtcaagccgacg
aacccggcggcgatgctgaagatcaaaggcgtcggggaagcgaaattttttaaatacggg
gcctatttcatcgaatttttcaaaaatcttaacggatag
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