Paenibacillus konkukensis: SK3146_03610
Help
Entry
SK3146_03610 CDS
T09860
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SK3146_03610 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_03610 (uvrA_2)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SK3146_03610 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK3146_03610 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
AAA_25
nSTAND3
BCA_ABC_TP_C
DnaJ_CXXCXGXG
NACHT
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UQZ84364
LinkDB
All DBs
Position
complement(4192360..4195242)
Genome browser
AA seq
960 aa
AA seq
DB search
MARDNIVIKGARAHNLKNVDVTIPRDQFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGRP
HCPEHKIEITSQTVEQMVDRIMEYPERTRLQILAPIVSGRKGEHSKLLADIQKQGFVRVR
VNGEVMDLSEKIELDKNKKHSIEVVVDRIVVKADVQSRLADSLETALKLASGRVIVDVME
QEELLFSQNLACPECGFSIEELAPRMFSFNSPFGACPECDGLGSKMIVDPDLLVPNPKQS
IEEGAFEAWAGSTSNYYPQFLAAVCEHYGIPQNVPVSELTSEQMKKLLYGTGGEKVRFRY
ENDMGHRKEAMVAFEGIIPNLERRYRDTFSEGIREHIESYMSSKPCGKCKGQRLKPETLA
VTINSKNIAHVTSLSIGDAQEWAETLQLNDREMQIAHLILKEIKSRLGFLVNVGLDYLTM
HRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLIKTLEHMRDLGNT
LIVVEHDEDTMLAADYIIDIGPGAGIHGGKVVAQGTPKEIMEDPESLTGLYLSGKRFIPV
AAERRKPNGKWLEIKGAKENNLRNVSVKIPLGVFSCVTGVSGSGKSTLINEILYKTLAKE
LNGAKVRPGEYRDFVGLEHVDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVYSATNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVQYKG
KNISEVLDMTIEDACEFFKNIPRIHRKLQTLLDVGLGYMNLGQPATTLSGGEAQRVKLAA
ELYRRSTGKTIYILDEPTTGLHIDDIDRLLKVLHRLVENGDSVLVIEHNLDVIKTADYLI
DLGPEGGSKGGTIVATGTPEEVVKVEGSYTGRYLKPILERDRARSEDYAQRLKQMENAVV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagagacaatattgtcattaaaggcgcgagagcgcacaatctgaaaaatgttgac
gtaacgataccgcgcgatcagttcgtcgtgctgacgggtctcagcggttcgggtaagtca
tcgctggcgttcgatacgatttatgcggaagggcagcgcagatacgtcgagtcgttgtcc
gcctacgcccggcagtttctgggacagatggataagccggacgtcgactctatcgaaggc
ttgtcgccggccatctccatcgaccagaagacgacaagccgcaacccgcgttccacggtc
ggaacggtaacggaaatttatgattatttgcgcttgctgttcgcccgtatcgggcggccg
cattgccccgagcataagatcgagattacgtcgcagacggtcgagcagatggtggaccgg
attatggaatatccggagcggacccgcctgcaaattttggcccctatcgtttccggtcgg
aagggcgagcattccaagctgcttgcggatattcagaagcaagggtttgttcgtgtgcgc
gtcaacggggaagtgatggacttatccgagaagatcgagctggacaagaacaagaagcat
agcattgaagtcgtcgtcgaccgtatcgtagtgaaggccgacgtgcagtcgcggcttgcc
gattctctcgaaacggcgttaaagctggcgagcggccgcgtcatcgtcgatgtgatggaa
caggaggagctgctattcagccaaaatttggcctgtccggaatgcggctttagcatagaa
gagctggcgcccagaatgttttccttcaacagcccgttcggggcttgtccggagtgcgac
gggctcggcagcaaaatgatcgtcgatccggatctgctcgttccgaatccgaagcaatcg
attgaggagggcgcattcgaggcatgggcgggcagtacgtccaattattatccgcagttt
ctcgctgctgtgtgcgagcactacgggattcctcagaacgttccggtgtccgaattgacc
tccgagcagatgaagaagcttttgtacgggaccggcggagagaaggtgcggttccggtac
gagaacgatatggggcataggaaagaagccatggttgccttcgaaggcattattcctaac
cttgaacgccggtatcgcgatacgttctccgaaggcattcgcgagcatatcgaatcgtat
atgagctccaagccttgcggcaaatgcaaaggccaacggttgaaaccggaaacgctggcc
gtaacgattaatagtaaaaatatcgctcatgtgacgtctctgtcgatcggggacgcccag
gaatgggccgagacgctgcagttgaacgatagagagatgcagattgcgcatttgatcttg
aaggaaatcaaatcgcggctcggttttctcgtcaatgtcggtttggattatttgacgatg
caccgggctgccgggactttgtcggggggagaggcgcagcggattcgcttggccacgcaa
atcggctccagcctgatgggagtcctctatattctggacgagccgagcatcgggctgcat
caacgggataacgaccgcttgatcaagacgcttgaacatatgcgcgatctcggcaacacc
ttgatcgttgtcgagcacgacgaggacacaatgctggccgccgactacattatcgacatc
ggtccgggagccggtattcacggaggcaaggtcgtagcgcaaggaacgccgaaggagatt
atggaagatccggaatcgttaaccgggctgtatttaagcggcaagaggtttattccggta
gccgccgagcgacgcaagccgaacggcaaatggctggaaattaaaggggcgaaggaaaat
aatctgcgcaatgtcagcgttaagattccactcggcgtgttctcttgcgtgaccggcgtg
tccggctcgggcaaaagtacgctaattaacgaaattttgtataaaacattggccaaagaa
ttgaacggagccaaggtgcgccccggagaataccgcgatttcgtcggtctggagcatgtc
gataaggttatcgatatcgatcagtcgccgatcggacggactccgcgttccaatcccgca
acatacacgggagtgttcgacgatataagggacgtttattcggctacgaatgaagccaag
gtgcgcggatacaagaagggccgcttcagcttcaatgtgaagggcggccgctgcgaagcc
tgccgcggggatggaattatcaagatcgagatgcacttcctgcccgacgtatacgttccg
tgcgaagtttgcaaaggcaagcgctataaccgggagacgctggaggttcagtacaaagga
aaaaatatttccgaagtattggatatgacgattgaggatgcatgcgagtttttcaaaaac
atcccgcgtattcaccgcaagcttcaaacgctgctggacgtaggtctgggctatatgaac
ctcggccagccggcgacgacgctgtcgggcggggaagcgcagcgcgtcaagctggcagcg
gagctgtaccggagaagcactggcaagacgatctatattcttgacgagccgacgacgggt
cttcatatcgacgatattgaccggctgttgaaggtgctgcatcgtttggtcgagaacggc
gatagcgtgctggtcatcgagcataatctcgatgtgattaaaacggcggactatttgatc
gatctgggacccgaaggcggaagcaaaggcggcacgatcgtagctaccggtacgccggag
gaagtagttaaagtagagggatcgtataccggccgctacttgaagccgattttggaacgg
gaccgtgctagatccgaagattatgcgcagcgactgaagcagatggagaatgccgtagtg
tag
DBGET
integrated database retrieval system