Paenibacillus konkukensis: SK3146_03611
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Entry
SK3146_03611 CDS
T09860
Symbol
uvrB_1
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SK3146_03611 (uvrB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_03611 (uvrB_1)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SK3146_03611 (uvrB_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK3146_03611 (uvrB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_5
AAA_25
AAA_22
Phage_Mu_Gp48
AAA
AAA_16
DUF3071
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UQZ84365
UniProt:
A0ABY4RQU8
LinkDB
All DBs
Position
complement(4195533..4197530)
Genome browser
AA seq
665 aa
AA seq
DB search
MNEVRMSDKRFELVSDFSPQGDQPKAIEQLVAGIRAGKKHQTLLGATGTGKTFTAAQVIA
ALNRPTLLIAHNKTLAAQLCSELKEFFPNNAVEYFVSYYDYYQPEAYIPSSDTFIEKDSS
INDEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPTEYRNLVLSLRTGMERPRNEILH
RLIDIQYQRNDINFVRGTFRVRGDVVEIFPASNSEHAVRVELFGDEIERITEIDVLTGEI
LGERDHIAIFPASHFVTHEDTMKRALVNIERELEERLAELRENGKLLEAQRLEQRTRYDI
EMMQEMGFCSGIENYSGPLTFRERGATPYTLFDYFPDDMLIVIDESHATIPQIRAMYNGD
RARKEVLVEHGFRLPSAMDNRPLRFEEFERKVTQALFISATPGPYEMEHCPEMVEQIIRP
TGLLDPIIEVRPTKGQIDDMLGEIHDRIRKDERVLVTTLTKKMAEDLTDYLKEVGIKVRY
LHSDIKTLERMQILRELRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRAERSL
IQTIGRAARNASGRVIMYGDKITDSMDKAIRETERRRGIQIAYNEKHGITPQTIQKKVRD
VIEAVKVAEQKADYLTDIKQTKMSKKDRMSMIERLEAEMKEAAKNLQFERAAELRDAVME
LKAEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgaggatgagtgacaagcgctttgagctggtctcggatttttctccgcaa
ggagatcagccgaaggcgatcgagcagctcgtggcaggcatacgggcggggaagaagcat
cagacgctgcttggagcgacgggtacgggcaagacctttaccgccgcgcaggtgattgcc
gcgctgaaccggccgacgctgctgatagcccacaacaagacgctggccgcgcagctgtgc
agcgaattgaaggagtttttcccgaacaacgcggttgaatatttcgtcagttattacgat
tactatcagccggaggcgtatattccttcgtccgatacgtttattgagaaggattcgagc
atcaacgacgagatcgacaagcttcgccactccgcgaccagctcgttattcgagcgccgc
gacgttattatcgtggccagcgtgtcttgcatatacggcttgggttcgcctacggaatac
cgcaatctcgtgctttcgctgcgcacgggaatggagcggccgcgcaacgagatcctgcac
cggctgatcgatatccaatatcagcgcaacgacatcaacttcgttcgcgggacgttccgc
gttcgcggcgacgtcgtcgagattttcccggcatcgaacagcgaacatgccgtcagggtc
gagctgttcggagacgaaatcgagcggattacggagatcgacgtgctgaccggggaaatc
ctcggcgagcgcgatcatatcgcgattttcccggcgtctcacttcgtaacccatgaggat
acgatgaagcgggcgctcgtgaacatcgagcgcgagctggaggaacggcttgcggagctg
cgcgagaacggcaagctgctggaggctcagcggcttgaacagcgtacccgttatgacatc
gagatgatgcaggagatgggattctgctccggcatcgagaactattcgggaccgctgacg
ttccgggagcggggagcgacgccttacacgctattcgattatttcccggacgatatgctg
atcgtcatcgacgaatcccatgcgaccataccgcagatccgggcgatgtacaacggcgac
cgggcgcggaaggaagtgctcgtagagcacggcttccgtcttccgtcggcgatggataac
cggccgctgcggtttgaggagttcgagcgtaaagtaactcaggcgctgttcatttcggcc
accccgggtccttacgagatggagcattgtccggagatggtcgaacagatcattcgtcct
accggcttgctcgatccgattatcgaggttcgtccgacgaaagggcagatcgatgacatg
ctcggggaaattcacgaccgcatccgcaaggatgagcgggttctcgtcacgaccctgacg
aagaagatggccgaagatttgaccgattacttgaaagaggtcggcattaaggttcgctat
ctgcattcggatattaagacgctggagcggatgcaaattttgcgggagctccggctcggc
accttccacgtgctggtcgggatcaacctgctccgcgaaggcctcgatcttccggaagta
tcgctggtggcgattctcgatgcggataaggaaggcttcctgcgcgcggaacgctcgctg
atccaaacgataggccgcgcggctcggaatgcgagcggacgggtcattatgtacggtgac
aaaatcaccgattcgatggataaagcgattcgcgagaccgagcgccgccgcggcatccag
atagcttacaacgagaagcacggcatcacgccgcagacgatccagaaaaaagtgcgcgat
gtgatcgaagccgtcaaggtagcggagcaaaaggcggactacttgaccgatatcaagcag
accaagatgtcgaagaaggatcggatgtcgatgatcgaacgcttggaggccgagatgaaa
gaagcggccaaaaatttgcagtttgaacgggccgctgagctacgcgatgcggtcatggag
ttaaaagccgagctgtag
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integrated database retrieval system
