KEGG   Paenibacillus konkukensis: SK3146_03648
Entry
SK3146_03648      CDS       T09860                                 
Symbol
mfd_1
Name
(GenBank) Transcription-repair-coupling factor
  KO
K02240  competence protein ComFA
Organism
pkp  Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:pkp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkp02044]
    SK3146_03648 (mfd_1)
Secretion system [BR:pkp02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   SK3146_03648 (mfd_1)
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Flavi_DEAD AAA_30 Cas3-like_C_2 AAA_19 Helicase_RecD P-loop_SecA TrwB_AAD_bind UvrD-helicase
Other DBs
NCBI-ProteinID: UQZ84402
LinkDB
Position
complement(4234520..4236442)
AA seq 640 aa
MKAILYAVISGDAVRWQASLDIQADMTLWFGRYPGSVRIRMLEPAFSFGQAVVLRDKLNV
LQWAGKGGLAPERFVKAVRECAEDTLIGRDTVNRLQPVDCSYSQWLAYRQAQGVTFRIDS
AELDRLVSLMQGRSLLMDEVKQLMEHYGLSNASAEPLAYVQTAYLLGLLRLDQGISLQQK
RKLRWWGGKPSYRCHRCGGGAEHMVFTECMFCGTSCPYCEQCLTMGRSRYCSVTISSAEG
HHEPSAAAKELAATLASAEEPPLEAYLAPWGLSEIQAEASGEALRFLKGNELQTINKKTN
QPKQFLIWAVTGAGKTEMIFPMIQYTAAQGRRVVVATPRRDVVLELKPRLEKAFSPIPVV
TLYGGSEQRWDAAPITIATTHQLLRFESTFDLVIIDELDAFPYHNNPMLQYAAEKVCMPG
GATILLSATPPLQLQKAAKRGALPHVKVTTRYHRHPLPVPVLLTMPPLRQQLEKSALAPV
IKQKIEASLQRGAQVFVFVPKIHMVEPLTKLLSSSFPHVTTQGTSSKDEHRGQKVIDFRG
RNTRILVTTTILERGVTIPKSDVLILDAGEPIFDSAALVQMAGRAGRSADDPAGHVYFAA
QEKTRAQVEAVRQIKSMNALARKKGYLHDKGEIKPHGNSS
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgaaggctattttatatgcggtgattagcggcgatgcggtccgatggcaagcatctttg
gatattcaggcagatatgacgttatggttcggacggtatccgggttcggtacgaattcgg
atgctggagccggccttttcattcggacaagccgtcgtgcttagggacaagctgaatgtg
cttcaatgggcaggcaagggaggacttgcgcccgagaggtttgtgaaagcggtgcgggag
tgtgccgaagacacgcttatcggcagagacacggtgaaccggctgcagccggtcgattgc
agctacagccagtggcttgcatatcggcaggcgcaaggagtgacgtttcgtatcgacagc
gccgaattggacaggctggttagtctcatgcaaggccgcagcctgctaatggatgaggtg
aagcagctaatggagcattatggcttatcgaatgcttccgctgagccgcttgcttatgta
cagacggcctacttgctcgggctgctccggctggatcaaggaatatcgctgcagcagaaa
cgcaagcttcgctggtggggcggcaaaccaagctaccgctgccatcgctgtgggggcgga
gccgagcatatggtgtttacggaatgtatgttttgcggaacgtcgtgcccctattgcgag
caatgcttaacgatgggacgatcccggtactgctcggttacgataagctcggccgagggc
catcatgaaccaagcgctgcggcaaaggaactggccgccaccttagcaagcgcggaggaa
ccgcccttggaggcttatttagctccgtgggggttaagcgagattcaggcggaagcgtcg
ggcgaagcgttgcgatttttgaaagggaatgaattacaaacgatcaataagaagacaaat
cagcctaaacaattcctgatttgggcggttaccggggcgggaaagaccgagatgatcttt
ccgatgatccagtatacggcggcgcaagggaggcgtgtcgtagtggctacaccgaggcgg
gatgtggtgctggagctgaagccgcgattggagaaggcgttctcgcctatcccggtcgtt
acgttatacggggggagcgagcagcgctgggacgcggctccgatcacgattgcgacaacc
catcagctgctgcggttcgagagtacatttgacctcgttatcatcgatgaattggatgcc
tttccttaccacaataatcctatgcttcaatatgcggcggaaaaagtatgcatgccgggc
ggagcgaccattctgctgtccgcaacgccaccgttacagctgcaaaaagcggcgaagcgc
ggcgcgctgcctcatgtaaaagtcacgacccggtatcatcgtcatccgctgccggttcct
gtgctgcttacgatgccgcctttgcgtcagcagctggagaaatccgcgctagcgccggtg
attaagcagaaaatagaagcatccttacagcggggagcgcaagtgttcgtctttgtgccg
aaaattcatatggtagaaccgctgacgaaactgcttagttcttcttttccgcacgttaca
acccagggaacctcctccaaggacgaacaccggggacagaaggtcattgattttcgcggc
aggaatacgcggattttggtgacgacgacgatattggagcgcggcgtcacgatccccaaa
tcggatgtgctgattctcgatgcaggcgagccgatcttcgattccgccgctttggtgcaa
atggcagggagagcgggaagatccgccgacgatccggccgggcatgtttattttgccgcg
caagagaagacgcgcgcccaagtggaagcagtccgtcagatcaagagcatgaacgcatta
gccaggaagaagggctatctgcatgataaaggagagatcaagcctcatggaaactcgtca
tag

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