Paenibacillus konkukensis: SK3146_04091
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Entry
SK3146_04091 CDS
T09860
Symbol
degA_3
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkp03000
]
SK3146_04091 (degA_3)
Transcription factors [BR:
pkp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SK3146_04091 (degA_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
TetR_N
HTH_31
HTH_Tnp_ISL3
HTH_26
DUF5614
TnsD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UQZ84836
LinkDB
All DBs
Position
complement(4724865..4725890)
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AA seq
341 aa
AA seq
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MTNTKKLTIEDVAKRAGVGIATVSRALNNHTGISAKTKAKILQVVEEMGFIPNTSAQSLK
IRQTRQIALAVPDIRNAIIPDIAWSVEQAAKQHGYRVVQINTLGNAMLELETLRELEKLH
VDGLVIMPLAYPKQLEPMINQAGIPVSVINYGKKMSEELNADIVGMARQEGKLVMEHLQQ
VGRSRIAYAGAPKQKIEERYFAYEQSLNHVDPSLVYFGEDFSFETGRQAANYFYSLKNMP
DAIYAVNDMVAIGIVNRLKELGVRVPEDVAVAGIDNNLWATVTTPQITSVSIMGSEVGRL
AAELLLKRIQYPNTTGYERVEFEPRLIVRESTVKMNQYAKN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaccaaaaagctgacgatcgaggatgtcgccaaacgggccggcgtcggcatc
gccaccgtatcccgggcgcttaacaatcatacaggcatcagcgccaagacgaaggccaaa
attttgcaggtcgttgaggagatgggcttcattcccaacacctcggcccaaagcctgaag
attcgccaaacgcgccagattgcgctggctgtcccggatattcgcaatgcgattattccg
gatatcgcctggtcggtcgagcaagccgccaagcagcacggataccgggtcgtgcagatc
aacacgctcggcaacgcgatgcttgagttggagacgctgcgggagctggagaagctgcat
gtggacgggctggtcataatgcccttggcctaccctaaacagctggagccgatgatcaat
caggcgggcattccggtatctgtcattaattacggtaaaaaaatgagcgaggagttaaac
gcggatattgtcggtatggcgcgccaggaaggcaagcttgtaatggagcatctgcagcaa
gtaggccgcagccgaatcgcttatgccggcgcgccgaagcagaagatcgaggagcgttat
tttgcctatgagcagtcgctgaatcatgtcgacccgtcgctcgtctatttcggagaggac
ttctcgtttgaaacgggccgccaggcggcgaactatttttacagcctcaaaaatatgccg
gacgcgatctacgcagtgaacgacatggtagctatcggcatcgtcaaccggctcaaggag
ctcggagtgcgagtaccggaggacgtggcggtggcgggcatcgacaacaatctgtgggcg
acggtgacgacgccgcagatcacttccgtctccatcatgggcagcgaagtaggcagactc
gcggcggagctgctgctcaagcgcatccagtatccgaatacgacgggatatgagcgggtg
gaattcgagccgcggctcatcgtaagagaatctaccgtcaaaatgaatcaatatgccaag
aactga
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