Paenibacillus konkukensis: SK3146_04115
Help
Entry
SK3146_04115 CDS
T09860
Symbol
rpoE_3
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SK3146_04115 (rpoE_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkp03021
]
SK3146_04115 (rpoE_3)
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_04115 (rpoE_3)
Transcription machinery [BR:
pkp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SK3146_04115 (rpoE_3)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SK3146_04115 (rpoE_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Mnd1
Motif
Other DBs
NCBI-ProteinID:
UQZ84860
UniProt:
A0ABY4RS39
LinkDB
All DBs
Position
4751748..4752332
Genome browser
AA seq
194 aa
AA seq
DB search
MSAQYTLKVGAEQAKEMPMVDLAFELLKAANTPFYYRDLMAEIAKIKGLSEDDVMQVIAQ
LYTEINIDGRFACVGTNLWGLKRWYPVEKSEDAVGSGKRPRIINDEDDDMDEEDLYAEEE
DVFTEEEDYDSFDKVRDEDDFDSEEEAEEDSEFFEEEEIEEEELEDADLEEELDEDSEES
EEEEFEDEEEEEEK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacagtacactctcaaggtcggtgcggagcaggctaaagaaatgccgatggtc
gatcttgcatttgaattgctgaaagcggctaatacgcctttttattaccgggatctaatg
gcggaaatcgccaaaattaaaggcctctctgaagacgatgtcatgcaggttatcgctcaa
ctatatacggagatcaacattgacggcaggttcgcttgcgtcggaaccaacttgtgggga
ttgaagcgctggtatccggtggagaagtccgaggatgcggttggcagcggcaaacgtccg
cggatcatcaacgacgaggacgacgatatggacgaagaagacttgtacgcagaggaagag
gacgtatttaccgaagaggaggattacgactccttcgataaggttcgcgacgaagacgac
ttcgattccgaagaagaggctgaggaagactccgagttcttcgaagaggaagaaatagaa
gaagaggagctggaagacgccgacttggaagaagagctggacgaggattcggaagagtcc
gaagaggaagaattcgaagacgaagaggaagaagaagagaaataa
DBGET
integrated database retrieval system
