Paenibacillus konkukensis: SK3146_04473
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Entry
SK3146_04473 CDS
T09860
Symbol
sinR_2
Name
(GenBank) HTH-type transcriptional regulator SinR
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkp03000
]
SK3146_04473 (sinR_2)
Transcription factors [BR:
pkp03000
]
Prokaryotic type
Helix-turn-helix
XRE family
SK3146_04473 (sinR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
SinI
HTH_19
HTH_26
HTH_25
Sigma70_r4
HTH_37
HTH_10
KorB
HTH_IclR
SGT1
Motif
Other DBs
NCBI-ProteinID:
UQZ85190
LinkDB
All DBs
Position
5108964..5109290
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AA seq
108 aa
AA seq
DB search
MIGRRVKQLRMEKGLTLTELAEKAGVAKSYLSSIERDIQSNPSIQFLEKICAVLEVPIES
FLQNKTALQQELDEDWLGLVREAMDSGISKEQFLEFLEYNKWRKNNHK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcagacgcgtgaagcaattgcgaatggaaaaaggactcaccctcacggagctc
gcagaaaaggccggagtagctaaatcctatttaagctcgatcgaaagggatattcagtcc
aatccgtccatccagtttttggagaaaatatgcgcggttcttgaggttcctatagaatca
tttttgcaaaataaaaccgcccttcagcaggagctggatgaagattggctggggcttgtc
cgcgaagctatggactcgggaatcagcaaagagcagtttctggagtttctcgaatataac
aagtggcgtaaaaacaaccacaaataa
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