Paenibacillus konkukensis: SK3146_04747
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Entry
SK3146_04747 CDS
T09860
Symbol
degA_4
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkp03000
]
SK3146_04747 (degA_4)
Transcription factors [BR:
pkp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SK3146_04747 (degA_4)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_7
HTH_26
HTH_Tnp_ISL3
Trp_repressor
HTH_24
HTH_6
MarR
Motif
Other DBs
NCBI-ProteinID:
UQZ85458
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Position
5448832..5449857
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AA seq
341 aa
AA seq
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MDAAVTNKEITIKDVAKQANVSVATVSRVLNGRDRVSDATRKKILKIIEELNFVPSTMAA
SMVKKKTNMLAVVVPEIQNPFYTAVIGGTVEIANNEGFFTIVISTNGNETEEEEFFESFL
SKNVDGIVLIGTHREAGFYRNIRKPTILVDRYINDSGHDGVLIDNYRGAYEATKHFVDYG
HERIAIIDGEHDFNDGKDRYWGYRQAMLEGGLTPDPKYHKQGKWLEEDGYRFAMELLQAE
QPPTAIFAANNVICKGVIRAVRDLNLQIGEDISLIGFDENELAQFVQPRVTVVARPTREM
GVQAAEMLIQKIKGEPKEQAKPKKVILDVELMKYGSVKKLK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctgtgacgaacaaggaaatcacgataaaggatgtagcgaagcaggccaat
gtgtctgtagcaaccgtatctcgcgtcctcaacggacgggatcgggtaagcgacgcgacc
cgcaagaaaatattgaagatcatcgaggagctgaattttgtgcccagcacgatggccgcc
tcaatggttaagaaaaagaccaatatgcttgccgttgtcgtcccggagattcagaacccc
ttctacaccgcggtcatcggcgggacggtagagatagccaataatgaaggcttcttcacg
attgttatctccacgaacggcaatgagacggaggaagaagagtttttcgagagcttcctg
agtaagaacgtcgacgggatcgtgctgatcggcacgcatagggaggccgggttttaccgg
aatattcgcaagccgacgattctggtcgatcgctatatcaatgacagcgggcatgacgga
gtgttgatcgataactaccgcggagcttacgaggctaccaagcattttgtggattacggt
catgagcgaatcgcgattattgacggggagcatgattttaacgatgggaaggatcgttat
tggggctatcgccaagcgatgcttgaaggaggtctgactcccgatccgaagtaccataag
caagggaaatggcttgaagaggacggctaccggtttgcgatggagctgttgcaggcggag
cagccgccgaccgcgatatttgccgccaacaatgtcatctgcaaaggcgtgatcagggcc
gttcgcgacttgaacctgcagatcggcgaggatatatccttgatcggttttgacgaaaat
gagctggcgcagttcgtacagcccagagtgaccgtcgtcgccagaccgacgagagagatg
ggggttcaagcggcggaaatgctcatccagaaaatcaagggagagcccaaagaacaggcg
aagccgaaaaaagtcatactggatgttgagttgatgaagtacggctcggtcaaaaagctg
aagtga
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