KEGG   Paenibacillus konkukensis: SK3146_04778
Entry
SK3146_04778      CDS       T09860                                 
Name
(GenBank) CRISPR-associated protein (Cas_Csd1)
  KO
K19117  CRISPR-associated protein Csd1
Organism
pkp  Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:pkp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pkp02048]
    SK3146_04778
Prokaryotic defense system [BR:pkp02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    SK3146_04778
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: UQZ85489
UniProt: A0ABY4RUS8
LinkDB
Position
5488788..5490689
AA seq 633 aa
MSWLLNLYKTYESNLGVVGVVEVKHNDREFTLLPISHTTQNAHIEVDITEDGEFHSARVL
DKNEMSTLIPCTEESASRAGSKVAPYPLHDKLSYVAGDFTAYGGDKEEPFAAYIKQLGDW
ANSPYAHAKVKAIYLYLSKRQLIKDLIEKENILCIDSDNRLVEKWDKKYETLYKERPLIF
SAISGSQDSAFVRFNVYSPHRSLSKVWKDQEMYDSFVRHYQGLLGDEDLCYVTGETSPST
DRHANKIRNAADKAKLISANDTSGFTFRGRFQHSHQAASISYDVSQKAHNALKWLINRQG
KVIDQRVFLIWGNEALDFPDPLEDPFSFDLGPLKEAIQKSKTRQDVAREFAKALAGYKHD
LSSKSDVNILVLDSATTGRMAVLYYRNMNNELYLDRLAQWHSTCIWLHSYRKDDKGEYVR
FLGAPATKDIAFAAYGPRAGDKLVKGLMERMLPCIVDGSPIPRDIVTSVFHRASNPVSMD
KWEWEKTLSIACALINKQMEKEGFEVALDTENNDRSYLFGRLLAVADVLERRALGEETRS
SNAIRYMNSFSMHPERTWMTIQKSLQPYQARLGTKGIYLSKLIDEIASMFTTEDFNNKAL
TGKYLLGFYSQRHELWKKNKTEDAAEASDHEER
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgagctggctgctcaatttatataagacttacgagtcgaatctgggcgtggtcggtgtc
gtcgaggtcaagcataatgatcgcgagtttaccctgctgccgatctctcatacgacgcag
aatgcccatattgaagtggatattaccgaagacggggagtttcactcggcgagagtgctt
gacaagaatgagatgagtacgttaattccatgcacagaggaatcggctagcagagcgggt
tccaaggtagcgccgtatccgctgcatgacaaactaagctacgtagcaggagacttcacg
gcgtatggcggggacaaagaggagccgttcgcggcctacattaaacagctgggggattgg
gcgaattcgccctatgctcatgcgaaggtaaaggcgatttatctttacttgagcaaaaga
cagctcattaaagacttgatagagaaagagaacattctgtgtattgactccgataaccgt
ttagtcgagaaatgggacaaaaagtacgaaacgctttacaaggaaaggcctttgattttc
tctgcgatcagcggcagtcaggacagcgccttcgtccggtttaatgtatattcgccgcat
cgcagcttgtccaaggtatggaaggatcaggagatgtacgattcattcgtacgccattac
caagggctgcttggcgacgaagatttatgctatgtgacgggagaaacatcgccgagtacg
gacaggcatgcgaataaaattcgcaacgcagcggacaaagcgaagctcatctcggccaat
gatacgagcggatttacgttccggggccgattccagcatagtcatcaagcggcgagcatc
agctatgacgtatcgcagaaagcgcataatgcattgaaatggctgattaaccgtcaaggc
aaggttatcgatcagcgggtttttctgatatggggtaacgaggctctggattttcccgat
ccgttggaagatccgttttcctttgatcttggtccattaaaggaggctattcagaagtcg
aagacgagacaggatgttgcaagagaatttgccaaggcactggctggctacaagcatgac
ttgtcgtccaagtccgatgtgaatattctggtgcttgactccgcaacgacggggcgcatg
gccgtgttgtactaccgcaatatgaacaatgaactttacttggatcggctcgctcagtgg
cattccacctgcatatggctgcatagctatcgcaaggatgacaagggcgaatatgtcaga
tttttaggagctcctgcgacgaaggatattgcttttgccgcctatgggccgagagcgggc
gacaagctcgtcaagggcttgatggaacgcatgctgccctgcattgtggatgggagtccc
attcccagagatattgtgaccagcgtatttcaccgggcatccaatcctgtatcgatggat
aaatgggagtgggagaaaacgctcagcattgcttgtgctctaatcaacaaacagatggaa
aaggaggggttcgaggtggcgttagatacggaaaataatgatcgcagttatttattcggc
cgtttgttggctgttgcggatgtattggaacgacgggcgttgggggaggagacgcgctcc
agcaatgcgattcgctatatgaattccttctcgatgcatcccgagagaacctggatgacg
atccagaagagcttacagccttatcaggcgcggctgggcaccaagggtatttatttatcc
aaactgatcgacgagattgcatccatgtttacgacggaagactttaacaataaagcgtta
acgggaaaatatttactgggcttttacagccaacggcatgagctttggaagaaaaataaa
acggaggatgcggcggaagcatccgatcatgaggagagataa

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