Paenibacillus konkukensis: SK3146_04780
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Entry
SK3146_04780 CDS
T09860
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pkp02048
]
SK3146_04780
Enzymes [BR:
pkp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
SK3146_04780
Prokaryotic defense system [BR:
pkp02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
SK3146_04780
Subtype I-B factors
SK3146_04780
Subtype I-C factors
SK3146_04780
Subtype I-D factors
SK3146_04780
Type II CRISPR-Cas system
Subtype II-B factors
SK3146_04780
BRITE hierarchy
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UQZ85491
LinkDB
All DBs
Position
5491548..5492210
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AA seq
220 aa
AA seq
DB search
MAYNADEDHDLMLSGIQHFQFCKRQWALIHIEQQWEENVRTVEGQHLHHKADQPFVREKR
GDKLIVRAMPVKSSELQITGVCDVVEFVRDEDGVEIHGAEGKYVAYPVEYKRGKPKLHDA
DLLQLTAQAMCLEEMLLCEVRTGFLFYNEIKHRVEVPLTAEMKHQVKTIVLEMQDYYKHR
HTPKVKTGSFCHSCSLHSICLPELMNKRTVKSYIEGTITG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcctataacgcagatgaagatcatgatcttatgctatcagggatacagcattttcaa
ttttgcaagcggcagtgggcgcttattcacatagaacaacaatgggaagagaatgtcagg
accgttgaagggcagcatttgcatcataaggcggatcagccgttcgttcgcgagaagcgg
ggagataagctcatcgtccgtgcgatgcccgtaaaatcctccgagcttcagatcaccgga
gtctgtgatgtggtggagttcgtaagggatgaagacggcgtcgaaattcatggagctgag
ggaaagtatgtggcctatccggtggaatacaagcggggcaagcctaagcttcacgacgcg
gatctgttgcagcttacggcgcaagcgatgtgcctggaggaaatgctgctgtgcgaggtc
cggaccgggttcctattttataatgagatcaagcatagggtcgaagtgccgctgacggca
gagatgaaacatcaagtgaagaccattgtcttggaaatgcaggattattataaacacaga
catacgcccaaagtaaagacaggttccttttgccatagctgttcccttcattctatatgt
ttgcccgagctcatgaataaacggaccgtaaaaagctatatcgaagggactattaccgga
tga
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