Paenibacillus konkukensis: SK3146_05542
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Entry
SK3146_05542 CDS
T09860
Symbol
degA_5
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkp03000
]
SK3146_05542 (degA_5)
Transcription factors [BR:
pkp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SK3146_05542 (degA_5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
YdaS_toxin
HTH_35
MarR
HTH_3
HTH_10
HTH_Tnp_ISL3
KR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
UQZ86249
LinkDB
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Position
6364299..6365348
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AA seq
349 aa
AA seq
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MSKHRSVTIVDIAEAAGVSIATVSNVLNRRKVPMAEETIRKVEKAAEELGYRRNVMAASL
SRKKSYELGLIVPGFIGYYGLFAEVMERTAHRFGYHMSVFSAGGYDPDMEKRHLDVLLQR
RVDGLFCHGLAMSTDTTRHIVSDGTPLVLFNGWNWPQDIAAGAVNLDFAGGCLEAVRHLV
RQGCRSLFYLGRSRAHETNKQRLKGFRQGAAEAGDGIRSYVLEADPQPMAELVRMTREMS
GDGPVGILAFDDLVALRFMSAAIEQGLRVPEEYKIFGINNDVVSHSCYPQITTLDIPYSQ
QARLAVDLMLRQLGEDEKAGEEHERQALREGHEIRIPLTLIPRLSTAAT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaccgttccgttaccatagtagatatagcggaagcagcgggcgtttccatc
gctactgtgtccaatgtattgaaccggcgcaaagtgcccatggccgaagaaacgatccgt
aaggtggagaaggcggccgaagagctgggctatcgccgcaatgtgatggcggccagtcta
agccgcaagaagtcttacgagctgggactgatcgtccccggttttatcggctactacggg
ctttttgccgaagtgatggaacgtacggcgcaccggttcggataccatatgtccgtgttc
tcggcaggaggttacgacccggacatggagaagcggcatttggacgtactgcttcagcgc
agggtggacgggctgttctgccacggcttggcgatgtctacggatacgacgcgccatatc
gttagcgacgggactccgcttgtgctgtttaacggctggaattggcctcaggacatcgct
gccggagcggtcaatctggattttgccggaggctgtttggaagcggtgcggcatttggtt
cggcagggctgccggtctttgttttatctggggcggtcgcgggcgcatgagacgaacaag
cagcgcttgaaaggattccgccaaggggctgccgaggccggagacggaattcgctcttat
gtcttggaagcggaccctcagccgatggccgagctggtccgcatgacccgggagatgagc
ggggacgggccggtcggcattctcgcctttgacgatctcgtggcgcttcggtttatgtcc
gcagcgatcgagcagggtttgcgggtgccggaggagtacaaaattttcggcatcaacaac
gatgtcgtctcccactcctgctacccgcagatcacgacgctcgatatcccgtacagccag
caggccaggttggccgtcgatctgatgctccggcagctgggagaggatgagaaggccggc
gaggagcatgagcggcaggcgcttcgcgaagggcacgagattcgcattccgctgaccttg
attccgcgtttatcgacggcggctacataa
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