Paenibacillus konkukensis: SK3146_05617 Help Entry SK3146_05617      CDS       T09860                                  Symbol rtcB_2 Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism pkp  Paenibacillus konkukensis Brite KEGG Orthology (KO) [BR:pkp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:pkp03016]     SK3146_05617 (rtcB_2) Enzymes [BR:pkp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      SK3146_05617 (rtcB_2) Transfer RNA biogenesis [BR:pkp03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     SK3146_05617 (rtcB_2)  Prokaryotic type    tRNA splicing ligases     SK3146_05617 (rtcB_2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  UQZ86324 UniProt:  A0ABY4RY47 LinkDB All DBs Position 6466642..6467868 Genome browser AA seq 408 aa AA seqDB search MAYQVIDGVRVWGKPDEGALAQARTCASHGNVIQALLMADHHKGYSQPIGGVVAYDGQIS PSGVGYDIGCGNKAVRTNLQAADLMPRIGQVMDLIAKRVSFGIGRANSEKVDHELFDDPD WSVYLAVGRQERDKLKALAREQLGTVGSGNHYVDLFEEAGTGRLWIGNHFGSRGFGHKTA SGFLNLAAGREFLGRAPGESMDQPPVLLDMGSELGDMYYRAMKLAGRYAYAGRDYVIRQV LSLLGAEAELEVHNHHNYAWKERYHGREAIVVRKGATPSAPGQLGFIGGSMGDISVIVRG KETEENRDAFYSTVHGAGRIMSRTQAAGKMNWKTRSRSGGQISPEQMQAAVRSFGVELRG AGTDESPFVYRKLQEVLDAHADTIDVLHVLKPIGACMAGADEFDPYKD NT seq 1227 nt NT seq  +upstreamnt  +downstreamnt atggcatatcaagtgatagacggagtgcgggtgtgggggaagccggatgaaggggcgctg gcccaagcgcgaacatgcgcgtctcacggcaatgtaatacaagcgctgctgatggcggat catcataaaggctacagccagcctatcggcggcgttgtcgcctacgacggtcaaatctcg ccttcgggtgtcggctacgatatcggctgcgggaataaagcggttcgcacgaatttgcag gcggcggacttgatgccgcgcatcgggcaggtgatggacctgatcgccaagcgggtttcc ttcgggatcggccgcgctaacagcgagaaggtcgatcatgagctgttcgacgacccggat tggtcggtctatctggcggtcggccgtcaggagcgcgataaattaaaagctttggcccgc gagcagctcggcacggtcggcagcggcaaccattacgtcgatttgttcgaagaggccgga accgggagactgtggatcggcaaccatttcggcagccgcgggttcggccataagacggcg agcggatttctcaatttggccgccggccgcgagtttctggggcgcgctccgggagagagc atggatcagccgccggtgctgctcgatatgggcagcgagctcggcgatatgtattaccgg gcgatgaagctggccggcaggtacgcttatgcgggaagagattacgttattcgtcaggtg ctgtccctgctcggggctgaggccgagctggaggtgcacaatcatcataattacgcctgg aaagagcggtatcacggtcgcgaggcgattgtcgtccgcaagggagcgacgccgtcggct ccgggccagctcggttttatcggagggagcatgggcgatatttcggtcatcgtgcgcggc aaggagacggaggagaaccgggatgccttttacagcacggttcacggcgcgggcagaatt atgagccgcacgcaggctgcgggcaaaatgaactggaaaacccgcagccgctctggcggc cagatctcgccggagcagatgcaagcggcggtccgcagcttcggcgtcgagctgcgcgga gccggaaccgacgagagtccgttcgtctaccgcaagctgcaggaagtgctggatgcccat gccgacacgatcgacgtcctgcatgtgctcaagccgatcggcgcatgtatggccggagcc gatgagttcgatccgtataaggattaa

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