Paenibacillus konkukensis: SK3146_06080
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Entry
SK3146_06080 CDS
T09860
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03410
Base excision repair
pkp03430
Mismatch repair
pkp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK3146_06080 (recJ)
03430 Mismatch repair
SK3146_06080 (recJ)
03440 Homologous recombination
SK3146_06080 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkp03400
]
SK3146_06080 (recJ)
DNA repair and recombination proteins [BR:
pkp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SK3146_06080 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SK3146_06080 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SK3146_06080 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Porin_8
Motif
Other DBs
NCBI-ProteinID:
UQZ86787
UniProt:
A0ABY4RWU1
LinkDB
All DBs
Position
6997727..7000174
Genome browser
AA seq
815 aa
AA seq
DB search
MLQSRARWKISETDSKQAEELAGQLEISPLLAHLLISRGMTDQEHAAAFLFGGTDHIHDP
FLLDGMEQAVVRIRQALERGEKIRIYGDYDADGVSSTTLMVHLLRTLDASFDYYIPHRVH
EGYGMNKPAVDLAKQEGISLIITVDTGISAVEEIAYASELGIDVIVTDHHEPPEVLPEAY
SVINPKKPGCPYPFKQLAGVGVALKLAQALLGRWPEELLEFAAIGTVADLMPLLGENRAI
VKQGIKRMQSSANWGIRALLDVSGVQMKDVNATHIGFSLAPRINASGRLNNADDAVRLLI
TDSEQEAEHLAYDLDSLNKERQRIVDDMTRQAMSMMEERKASGGLNKVIVLAHEDWNVGV
IGIVASKLMDRFYRPTLILGIDKETGLAKGSARSIAGFDLYQALSHCHDLMEHFGGHQAA
AGMTLSKDHLPELERRLNVLAEEWLKPGDFVPLLHADMECALDEVGVETIRQLEQLGPFG
MGNPQPKFVFTNIRCQELRTIGKEQQHVKMTLIKGGGEAAATLDAVGFNKSAALPWISPS
ASMDILGELSINEWNGVRKPQIMIQDIRVPHVQLFDWRGASSKLEFKLRELNSRVSPLAE
AEEGSGQPAVITFHPEDKQVRMKFMNTYPVWGMDPATGQGSPLNEHARRKPLSAVKDLVL
YDLPAQLGALEQVIVSASGAERWYAVFSGSPANQGPLPNRDIFKTVYGAVLKLGDQAFPA
SYITEALSRRSGQSQQLIQFILDVFEELGFIQRRPEGYRAVSNPAKKDLTASRLYRQRQH
SLDVEQTLVYSSAQELHEWISGKHKQMKPSLEEII
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatcacgagcaagatggaaaataagcgagacggattcaaagcaagcagaggaa
ttggccgggcaactggagatttctccattgctggcccatctgcttataagccgtgggatg
acggatcaagagcatgctgccgcatttttatttggaggaacggatcatatccacgatccg
ttccttttagatggtatggaacaagcggtagtacgcatacgccaggcattggagcgcggg
gaaaaaatccgcatctacggcgattacgatgcagacggggtcagcagcacgacgctgatg
gtacatttacttagaacgctggacgcttcattcgattattacatacctcatcgcgtgcat
gaaggatacggcatgaacaagccggccgtcgatctggcgaagcaggaaggcatctcgctc
attattacggtcgatacgggaatcagcgcggtggaagagatcgcctatgcgtcagagctg
ggcattgatgttatcgtcaccgaccatcatgagccgccggaagtgcttcccgaagcttac
tcggtcattaatccgaaaaagccgggatgcccttatccgttcaagcagctggccggtgtc
ggcgtcgccttgaagctggctcaggcgctgctcgggcgctggcccgaggagctgctcgaa
ttcgccgctatcggaacggtagcggacttgatgccgctgctcggcgagaatagagctatc
gtcaagcaggggatcaagcggatgcaatcctcggccaactggggaatccgcgcgctgctg
gacgtgtccggcgtgcaaatgaaagatgtgaacgctacgcatatcggtttctcgctcgcg
cctcgtattaacgcaagcggacgattgaacaatgcggacgacgccgtccggctgcttatt
acggacagcgagcaggaagccgagcatctcgcttacgatctggactcgctcaataaggaa
cgccagcgcattgtagacgacatgaccaggcaggccatgagcatgatggaggagcgcaaa
gcgtccggcggtttgaacaaagttatcgtgctcgctcacgaggattggaacgtaggcgtc
atcggcatcgtggcctcgaagctgatggaccgtttttaccgcccgaccctcatcttgggc
atcgataaggaaaccgggcttgccaaaggctccgcccgttcgattgccggcttcgacttg
taccaggcgctcagccattgtcacgatttgatggagcatttcggcgggcatcaagcggct
gcggggatgaccttatccaaagaccatcttccggagctggagcgacgcctcaacgtattg
gccgaagaatggctgaagccgggcgatttcgttccgctgctgcatgcggatatggaatgc
gctctggacgaggtcggcgtagagacgatccgccagctggagcagctgggaccgttcggc
atggggaacccgcagccgaagttcgtatttacgaacatccgctgtcaagagctgcggacg
atcggcaaggagcagcagcatgttaagatgacgctgatcaaaggcggcggtgaagccgcg
gcaacgctcgatgccgtcggttttaacaaaagcgcggcgctcccctggatttctccgtcc
gcatcgatggacatcttgggagaactgtccatcaacgaatggaacggcgtgcgtaagccg
caaattatgattcaggacattcgcgttccgcacgtgcaattgttcgactggcggggagct
tcaagcaagcttgaattcaagcttagggagctgaacagccgcgtaagtcctctggcagaa
gcggaggaaggcagcggacagccggctgtcatcacgtttcatccggaagataaacaggtc
agaatgaaatttatgaacacttatccggtatgggggatggacccggcgacaggacaaggc
tctccgcttaacgagcacgccaggcgcaagcctttatccgctgtcaaggatttggtatta
tacgatttgccggcacagctaggggcgctcgagcaggtcatcgtttcggcgtcgggcgcc
gagcgctggtatgccgtattctcgggttctccggcgaatcaggggccgcttccgaaccgc
gacatatttaaaaccgtctacggcgccgtgctgaaactgggggaccaagcgtttccggcc
tcgtatatcacggaagcattgtccagacgatcggggcaatcgcagcaattgattcaattt
attctggatgtattcgaagagctcggcttcatccagcgccgtccggaagggtacagggcg
gtatctaatccggccaagaaagatctgacggcatcaagattataccggcagcgccagcat
agcttggacgtcgaacagacgctggtttattccagtgctcaagaattgcacgaatggata
agcggcaagcataaacagatgaaaccatcattggaggaaatcatatga
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integrated database retrieval system
