Paenibacillus konkukensis: SK3146_06373
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Entry
SK3146_06373 CDS
T09860
Symbol
rluD_4
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkp03009
]
SK3146_06373 (rluD_4)
Enzymes [BR:
pkp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SK3146_06373 (rluD_4)
Ribosome biogenesis [BR:
pkp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SK3146_06373 (rluD_4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiS-like
Motif
Other DBs
NCBI-ProteinID:
UQZ87080
UniProt:
A0ABY4RZB6
LinkDB
All DBs
Position
7328212..7329162
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AA seq
316 aa
AA seq
DB search
MTSVSDQEQSDNIMEWIAGSEDRGERIDKFITESLEEETSRTQVQQWIKEGHLKVNGGPV
KANYKLAEGDRLALVIPEPEELNLTPENIPLDVVYEDSDVIVVNKPRGLVVHPAPGHYSG
TLVNALLHHCRDLSGINGVMRPGIVHRIDKDTSGLLMAAKNDLAHVSLAEQLKEHSVNRK
YIAVVHGNVAHDHGTIDAPIGRDPHDRKLYTVTEKNSKHAVTHFVVLERFGDYTLVELKL
ETGRTHQIRVHMKFIGHPLAGDPAYGPSRSKGVAMEGQALHAAVLGFVHPRTGQELQFEA
GLPEDMQHLLHALKNR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtttcggatcaggaacaatcggataacatcatggaatggatcgcgggatct
gaggaccggggagagcgtatcgacaaattcattacggaatcgctggaggaagaaacctcg
cgcacgcaagtgcagcagtggattaaagaggggcatctgaaggtgaacggaggccccgtc
aaagcgaactacaagctggcggaaggagaccggctggcgcttgtcattcccgagccggag
gagctgaatttgacgccggagaacatccctctcgacgtcgtgtacgaggattccgatgtg
atcgtcgtcaacaagccgcggggactcgtcgttcatccggctccggggcattacagcggg
acgctggtcaacgcgctgctgcaccactgccgggatttatccggcattaacggagtgatg
cgcccgggcatcgttcaccggatcgataaagatacgtccggcctgctgatggcggccaaa
aacgatttggcccatgtttcgctcgcggagcagctgaaggagcattccgtgaaccgcaaa
tatatcgccgtcgtgcacggcaatgtcgcgcatgatcacgggacgatcgacgctccgatc
ggccgagatccccatgaccgcaagctgtatacggtaacggagaaaaacagcaagcatgcc
gtcacgcatttcgtcgtgctggagagattcggcgactatacgctggtcgagctgaagctg
gaaaccggacgcacccatcaaatccgggtgcatatgaagtttatcggccatccgctggcc
ggcgatccggcttacgggccttcgcgcagcaaaggggtcgcgatggaagggcaggcgctg
cacgccgcggtgcttggattcgtccatccgcgcacggggcaagagctgcagttcgaggcc
gggctgccggaggatatgcagcatctgctgcatgcgttaaaaaatcgataa
DBGET
integrated database retrieval system
