KEGG   Paenibacillus konkukensis: SK3146_06711
Entry
SK3146_06711      CDS       T09860                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pkp  Paenibacillus konkukensis
Pathway
pkp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SK3146_06711 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkp03019]
    SK3146_06711 (rny)
Messenger RNA biogenesis [BR:pkp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SK3146_06711 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Innexin Propep_M14 KH_2 FUT8_N_cat
Other DBs
NCBI-ProteinID: UQZ87414
LinkDB
Position
7668784..7670325
AA seq 513 aa
MHPAIWILLILVVGALCFWIGYFIRKSLAEAKISSAEQAAEQIKENAKKEAEALKKETVL
EAKDEIHKLRTEAEKDIRDRRNETQRQERRLLQKEESLDKKLEALEKKEEQVANKEKRIE
ETQAQIDEIYKNQVAELERISALTMEDAKQIILTNVEQEVRHETAQLIKEIEQQAKEEGD
KKAREIITLAIQRCAADHVAETTVSVVSLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTSLEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FETGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDVTLAKRAGLL
HDIGKALDHEVEGSHVEIGVEIAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPEKVDDTEAFRL
ARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgcatccggccatctggatcttactcattctcgttgttggtgcgctatgcttttggatt
ggttattttatccgcaagtcccttgcagaagcgaaaatttcgagtgccgagcaagccgct
gagcagattaaagaaaatgctaagaaagaagcggaggcattgaagaaagaaacggttctg
gaagccaaggatgaaattcacaagctcagaaccgaagctgaaaaagacattcgtgatcgt
cgaaatgaaacacaacgacaagagagacgattgttgcaaaaagaggaatcgctggataaa
aaattagaagccctagagaaaaaagaagagcaggtcgccaacaaagagaaaagaatcgaa
gaaacgcaagcgcaaatcgacgagatttacaaaaatcaagttgccgagctcgaacggatt
tccgcccttacgatggaggacgcgaagcaaattatcctcacgaacgtagagcaggaagtt
cgccatgaaacggctcagctcatcaaggaaatcgaacaacaggccaaagaagagggcgac
aagaaggcgcgcgagattattacgctggcgatccagcgttgcgccgccgatcacgttgcg
gaaacgacggtttctgtcgtatcgctgcctaacgaagaaatgaaaggccgcattatcggc
cgcgaaggaagaaacatccgtgcattggaaacgctgacgggcatcgatctgatcatcgac
gatacgcctgaagcggtaattctttccgggtttgatcctattcgcagggagattgcccgc
acttcgcttgaaaaattggttgccgacggacgtatacaccctgcccgcatagaggaaatg
gtcgagaagtcgcgcaaggaagtggatgagcggattcgtgaatacggggaacaagctaca
ttcgaaaccggcgttcacggattgcatccggatttgatcaaaattttaggccgcttgaag
ttcagaaccagttatggacaaaacgtattgaagcattcgatggaagtggcctatttaacc
ggattaatggctggagagctcggggaagacgtgacattggcgaaacgtgccggtctcctg
catgacatcggtaaagctttggaccacgaagtcgagggttcacacgttgaaatcggtgtt
gaaattgccaagaaatacaaagagcatccggttgtcattaacagtattgcatcccaccac
ggcgattgcgaagccacatcggtcatcgctatgctggtaggcgcagcggatgcgctgtcc
gcggcccgtccgggagcgcggcgcgaaacgctggagacttacatcaagcgtctggagaaa
ctggaagaaatttccgagtccttcgaaggcgtcgagaagtcgtacgcgatccaagcaggc
cgcgaagtacgcgtgatggtgcagccggagaaagtcgacgatacggaagcgttccgtctc
gctcgcgacattaccaagaaaatcgagagcgagctcgattatccgggtcacatcaaagtc
actgtgattcgcgagacccgcgcggtcgaatatgcaaaataa

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