Paenibacillus konkukensis: SK3146_06711
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Entry
SK3146_06711 CDS
T09860
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pkp
Paenibacillus konkukensis
Pathway
pkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SK3146_06711 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkp03019
]
SK3146_06711 (rny)
Messenger RNA biogenesis [BR:
pkp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SK3146_06711 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Innexin
Propep_M14
KH_2
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
UQZ87414
LinkDB
All DBs
Position
7668784..7670325
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AA seq
513 aa
AA seq
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MHPAIWILLILVVGALCFWIGYFIRKSLAEAKISSAEQAAEQIKENAKKEAEALKKETVL
EAKDEIHKLRTEAEKDIRDRRNETQRQERRLLQKEESLDKKLEALEKKEEQVANKEKRIE
ETQAQIDEIYKNQVAELERISALTMEDAKQIILTNVEQEVRHETAQLIKEIEQQAKEEGD
KKAREIITLAIQRCAADHVAETTVSVVSLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTSLEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FETGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDVTLAKRAGLL
HDIGKALDHEVEGSHVEIGVEIAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPEKVDDTEAFRL
ARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggccatctggatcttactcattctcgttgttggtgcgctatgcttttggatt
ggttattttatccgcaagtcccttgcagaagcgaaaatttcgagtgccgagcaagccgct
gagcagattaaagaaaatgctaagaaagaagcggaggcattgaagaaagaaacggttctg
gaagccaaggatgaaattcacaagctcagaaccgaagctgaaaaagacattcgtgatcgt
cgaaatgaaacacaacgacaagagagacgattgttgcaaaaagaggaatcgctggataaa
aaattagaagccctagagaaaaaagaagagcaggtcgccaacaaagagaaaagaatcgaa
gaaacgcaagcgcaaatcgacgagatttacaaaaatcaagttgccgagctcgaacggatt
tccgcccttacgatggaggacgcgaagcaaattatcctcacgaacgtagagcaggaagtt
cgccatgaaacggctcagctcatcaaggaaatcgaacaacaggccaaagaagagggcgac
aagaaggcgcgcgagattattacgctggcgatccagcgttgcgccgccgatcacgttgcg
gaaacgacggtttctgtcgtatcgctgcctaacgaagaaatgaaaggccgcattatcggc
cgcgaaggaagaaacatccgtgcattggaaacgctgacgggcatcgatctgatcatcgac
gatacgcctgaagcggtaattctttccgggtttgatcctattcgcagggagattgcccgc
acttcgcttgaaaaattggttgccgacggacgtatacaccctgcccgcatagaggaaatg
gtcgagaagtcgcgcaaggaagtggatgagcggattcgtgaatacggggaacaagctaca
ttcgaaaccggcgttcacggattgcatccggatttgatcaaaattttaggccgcttgaag
ttcagaaccagttatggacaaaacgtattgaagcattcgatggaagtggcctatttaacc
ggattaatggctggagagctcggggaagacgtgacattggcgaaacgtgccggtctcctg
catgacatcggtaaagctttggaccacgaagtcgagggttcacacgttgaaatcggtgtt
gaaattgccaagaaatacaaagagcatccggttgtcattaacagtattgcatcccaccac
ggcgattgcgaagccacatcggtcatcgctatgctggtaggcgcagcggatgcgctgtcc
gcggcccgtccgggagcgcggcgcgaaacgctggagacttacatcaagcgtctggagaaa
ctggaagaaatttccgagtccttcgaaggcgtcgagaagtcgtacgcgatccaagcaggc
cgcgaagtacgcgtgatggtgcagccggagaaagtcgacgatacggaagcgttccgtctc
gctcgcgacattaccaagaaaatcgagagcgagctcgattatccgggtcacatcaaagtc
actgtgattcgcgagacccgcgcggtcgaatatgcaaaataa
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